RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 TIMM17AQ99595 171 aa11.3□□□□□ -0.6
CDH20-203ENST00000538374 IGHV3-38A0A0C4DH36 116 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 DEFB131AP59861 70 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 FHL3Q13643 280 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 TMEM141Q96I45 108 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 MTORP42345 2549 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 A4D1N5 150 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 TCTEX1D4Q5JR98 221 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
CDH20-203ENST00000538374 DLX4Q92988 240 aaPredicted RBP11.29□□□□□ -0.6
CDH20-203ENST00000538374 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
CDH20-203ENST00000538374 A6NJY4 79 aa11.28□□□□□ -0.6
CDH20-203ENST00000538374 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
CDH20-203ENST00000538374 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
CDH20-203ENST00000538374 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
CDH20-203ENST00000538374 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
CDH20-203ENST00000538374 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
CDH20-203ENST00000538374 SYT8Q8NBV8 401 aa11.28□□□□□ -0.6
CDH20-203ENST00000538374 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.6
CDH20-203ENST00000538374 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
CDH20-203ENST00000538374 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
CDH20-203ENST00000538374 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
CDH20-203ENST00000538374 ELANEP08246 267 aa11.27□□□□□ -0.61
CDH20-203ENST00000538374 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
CDH20-203ENST00000538374 FOXI1Q12951 378 aa11.27□□□□□ -0.61
CDH20-203ENST00000538374 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.61
CDH20-203ENST00000538374 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
CDH20-203ENST00000538374 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 Q6ZSV7 163 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 VCX2Q9H322 139 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 UBE2D3P61077 147 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 UBE2D2P62837 147 aa11.26□□□□□ -0.61
CDH20-203ENST00000538374 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
CDH20-203ENST00000538374 I3L3M4 83 aa11.25□□□□□ -0.61
CDH20-203ENST00000538374 RHODO00212 210 aa11.25□□□□□ -0.61
CDH20-203ENST00000538374 TMEM86BQ8N661 226 aa11.25□□□□□ -0.61
CDH20-203ENST00000538374 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
CDH20-203ENST00000538374 UNC79Q9P2D8 2635 aa11.25□□□□□ -0.61
CDH20-203ENST00000538374 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
CDH20-203ENST00000538374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
CDH20-203ENST00000538374 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
CDH20-203ENST00000538374 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
CDH20-203ENST00000538374 J3QR89 54 aa11.24□□□□□ -0.61
CDH20-203ENST00000538374 CD28P10747 220 aa11.24□□□□□ -0.61
CDH20-203ENST00000538374 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
CDH20-203ENST00000538374 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
CDH20-203ENST00000538374 PRSS2P07478 247 aa11.23□□□□□ -0.61
CDH20-203ENST00000538374 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
CDH20-203ENST00000538374 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
CDH20-203ENST00000538374 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
CDH20-203ENST00000538374 SPATA25Q9BR10 227 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 TMEM61Q8N0U2 210 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 DAND5Q8N907 189 aa11.22□□□□□ -0.61
CDH20-203ENST00000538374 LEPROTO15243 131 aa11.21□□□□□ -0.61
CDH20-203ENST00000538374 MT-ATP8P03928 68 aa11.21□□□□□ -0.61
CDH20-203ENST00000538374 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.61
CDH20-203ENST00000538374 DNAJC9-AS1A6NH13 148 aa11.21□□□□□ -0.62
CDH20-203ENST00000538374 SPINK8P0C7L1 97 aa11.21□□□□□ -0.62
CDH20-203ENST00000538374 ESM1Q9NQ30 184 aa11.21□□□□□ -0.62
CDH20-203ENST00000538374 Q1RN00 199 aa11.2□□□□□ -0.62
CDH20-203ENST00000538374 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
CDH20-203ENST00000538374 C9JAW5 83 aa11.2□□□□□ -0.62
CDH20-203ENST00000538374 RHOHQ15669 191 aa11.2□□□□□ -0.62
CDH20-203ENST00000538374 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
CDH20-203ENST00000538374 H3BMM0 161 aa11.19□□□□□ -0.62
CDH20-203ENST00000538374 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
CDH20-203ENST00000538374 ODF3Q96PU9 254 aa11.19□□□□□ -0.62
CDH20-203ENST00000538374 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
CDH20-203ENST00000538374 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
CDH20-203ENST00000538374 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
CDH20-203ENST00000538374 LINC01587Q99440 93 aa11.18□□□□□ -0.62
CDH20-203ENST00000538374 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
CDH20-203ENST00000538374 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
CDH20-203ENST00000538374 XGP55808 180 aa11.18□□□□□ -0.62
CDH20-203ENST00000538374 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
CDH20-203ENST00000538374 NDUFA7O95182 113 aa11.17□□□□□ -0.62
CDH20-203ENST00000538374 Q6ZUT4 128 aa11.17□□□□□ -0.62
CDH20-203ENST00000538374 TIMM21Q9BVV7 248 aa11.17□□□□□ -0.62
CDH20-203ENST00000538374 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
CDH20-203ENST00000538374 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
CDH20-203ENST00000538374 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
CDH20-203ENST00000538374 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.16□□□□□ -0.62
CDH20-203ENST00000538374 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
CDH20-203ENST00000538374 CHCHD7Q9BUK0 85 aa11.16□□□□□ -0.62
CDH20-203ENST00000538374 A8MWV9 139 aa11.15□□□□□ -0.62
CDH20-203ENST00000538374 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
CDH20-203ENST00000538374 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
CDH20-203ENST00000538374 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
CDH20-203ENST00000538374 LITAFQ99732 161 aa11.15□□□□□ -0.62
CDH20-203ENST00000538374 M0R2P5 195 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms