RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HERVK_113P61574 105 aa6.72□□□□□ -1.33
DDB1-211ENST00000538280 ODF3L2Q3SX64 289 aa6.72□□□□□ -1.33
DDB1-211ENST00000538280 CD300EQ496F6 205 aaPredicted RBP6.72□□□□□ -1.33
DDB1-211ENST00000538280 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
DDB1-211ENST00000538280 SPXQ9BT56 116 aa6.72□□□□□ -1.33
DDB1-211ENST00000538280 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
DDB1-211ENST00000538280 IGLV4-3A0A075B6K6 122 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 RHODO00212 210 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 RS1O15537 224 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 INSP01308 110 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 CRYBA4P53673 196 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 RBX1P62877 108 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 ZNRF2Q8NHG8 242 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.34
DDB1-211ENST00000538280 RAB37Q96AX2 223 aa6.71□□□□□ -1.34
DDB1-211ENST00000538280 SPANXB1Q9NS25 103 aaPredicted RBP6.71□□□□□ -1.34
DDB1-211ENST00000538280 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 IGLL5B9A064 214 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 K7ERJ3 54 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 RNASE1P07998 156 aaKnown RBP6.7□□□□□ -1.34
DDB1-211ENST00000538280 CD28P10747 220 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 KHDC1LQ5JSQ8 128 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 SAMD5Q5TGI4 173 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 CFAP126Q5VTH2 177 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 PLEKHB2Q96CS7 222 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 DNAJC30Q96LL9 226 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 AMELXQ99217 191 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
DDB1-211ENST00000538280 NHP2Q9NX24 153 aaKnown RBP6.7□□□□□ -1.34
DDB1-211ENST00000538280 SPCS1Q9Y6A9 102 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 AGRNO00468 2067 aa6.7□□□□□ -1.34
DDB1-211ENST00000538280 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 GAGE12BA1L429 117 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 CCL24O00175 119 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 IGHV3-53P01767 116 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 FABP2P12104 132 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
DDB1-211ENST00000538280 PROK1P58294 105 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 TSPEAR-AS2P59090 65 aa6.69□□□□□ -1.34
DDB1-211ENST00000538280 A0A0J9YY99 117 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 LEPROTO15243 131 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 UBE2D1P51668 147 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 CMC4P56277 68 aaPredicted RBP6.68□□□□□ -1.34
DDB1-211ENST00000538280 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 HIST2H2BDQ6DRA6 164 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 C1orf158Q8N1D5 194 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 LINC01006Q8NI28 216 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 LINC01587Q99440 93 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
DDB1-211ENST00000538280 CHCHD7Q9BUK0 85 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 CBY1Q9Y3M2 126 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 TSSC4Q9Y5U2 329 aaPredicted RBP6.68□□□□□ -1.34
DDB1-211ENST00000538280 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
DDB1-211ENST00000538280 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 PRM2P04554 102 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 EMP1P54849 157 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 RRN3P1Q2M238 152 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 SHISA2Q6UWI4 295 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 Q6ZSN1 163 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 CITED2Q99967 270 aaPredicted RBP6.67□□□□□ -1.34
DDB1-211ENST00000538280 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
DDB1-211ENST00000538280 IGHV3-73A0A0B4J1V6 119 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 A6NJY4 79 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 J3QQQ9 107 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 NDUFA7O95182 113 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 MRPS36P82909 103 aaKnown RBP6.66□□□□□ -1.34
DDB1-211ENST00000538280 STHQ8IWL8 128 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 SPANXA1Q9NS26 97 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 MRPL16Q9NX20 251 aaKnown RBP6.66□□□□□ -1.34
DDB1-211ENST00000538280 TNFRSF18Q9Y5U5 241 aa6.66□□□□□ -1.34
DDB1-211ENST00000538280 A0A0J9YXV3 536 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 IGLV1-51P01701 117 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 HTN1P15515 57 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 AZU1P20160 251 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 SCGB2A2Q13296 93 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 SCGB1D4Q6XE38 83 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 VCX2Q9H322 139 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
DDB1-211ENST00000538280 WNK1Q9H4A3 2382 aa6.65□□□□□ -1.35
DDB1-211ENST00000538280 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.35
DDB1-211ENST00000538280 A0A1W2PRX2 142 aa6.64□□□□□ -1.35
DDB1-211ENST00000538280 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
DDB1-211ENST00000538280 C19orf73Q9NVV2 129 aa6.64□□□□□ -1.35
DDB1-211ENST00000538280 Q9UF83 564 aa6.64□□□□□ -1.35
DDB1-211ENST00000538280 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
DDB1-211ENST00000538280 K7ERU9 68 aa6.63□□□□□ -1.35
DDB1-211ENST00000538280 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
DDB1-211ENST00000538280 KRTAP10-3P60369 221 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms