RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 AMTP48728 403 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 RBX1P62877 108 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 NRACQ8N912 160 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 TMEM70Q9BUB7 260 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 ST20Q9HBF5 79 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 SPATA12Q7Z6I5 190 aa15.15■□□□□ 0.02
SFSWAP-204ENST00000535399 UBE2WQ96B02 151 aa15.15■□□□□ 0.02
SFSWAP-204ENST00000535399 PSCAO43653 123 aa15.14■□□□□ 0.01
SFSWAP-204ENST00000535399 POLR2KP53803 58 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-204ENST00000535399 KRTAP10-2P60368 255 aa15.14■□□□□ 0.01
SFSWAP-204ENST00000535399 C10orf91Q5T1B1 145 aa15.14■□□□□ 0.01
SFSWAP-204ENST00000535399 TM2D2Q9BX73 214 aa15.14■□□□□ 0.01
SFSWAP-204ENST00000535399 LRCOL1A6NCL2 159 aa15.13■□□□□ 0.01
SFSWAP-204ENST00000535399 I3L3M4 83 aa15.13■□□□□ 0.01
SFSWAP-204ENST00000535399 ANGP03950 147 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-204ENST00000535399 PMCHP20382 165 aa15.13■□□□□ 0.01
SFSWAP-204ENST00000535399 ENHOQ6UWT2 76 aa15.13■□□□□ 0.01
SFSWAP-204ENST00000535399 PPP1R17O96001 155 aa15.12■□□□□ 0.01
SFSWAP-204ENST00000535399 DNAH5Q8TE73 4624 aa15.12■□□□□ 0.01
SFSWAP-204ENST00000535399 LRP1BQ9NZR2 4599 aa15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 TRBV27A0A0K0K1C4 114 aa15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 EREGO14944 169 aa15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 Q0VG73 95 aa15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 CTDSP1Q9GZU7 261 aa15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 CARHSP1Q9Y2V2 147 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-204ENST00000535399 A0A1B0GUV1 79 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 TSHBP01222 138 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 APCSP02743 223 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 MAPKAPK5-AS1Q8N8E1 139 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 C20orf203Q8NBC4 194 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 RMI2Q96E14 147 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 IMMP2LQ96T52 175 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 PRR34Q9NV39 138 aa15.1■□□□□ 0.01
SFSWAP-204ENST00000535399 IGLV4-60A0A075B6I1 120 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 C16orf90A8MZG2 172 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 UBE2L6O14933 153 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 CKS2P33552 79 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 SUMO2P61956 95 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 TMEM242Q9NWH2 141 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 COX11Q9Y6N1 276 aa15.09■□□□□ 0.01
SFSWAP-204ENST00000535399 IGKV2D-24A0A075B6R9 120 aa15.08■□□□□ 0
SFSWAP-204ENST00000535399 CRPP02741 224 aa15.08■□□□□ 0
SFSWAP-204ENST00000535399 LINC00269Q8N2A0 174 aa15.08■□□□□ 0
SFSWAP-204ENST00000535399 TRBV24-1A0A075B6N3 115 aa15.07■□□□□ 0
SFSWAP-204ENST00000535399 D6R8Y8 96 aa15.07■□□□□ 0
SFSWAP-204ENST00000535399 VCYO14598 125 aa15.07■□□□□ 0
SFSWAP-204ENST00000535399 ESDP10768 282 aa15.07■□□□□ 0
SFSWAP-204ENST00000535399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.06■□□□□ 0
SFSWAP-204ENST00000535399 IGKV2-29A2NJV5 120 aaPredicted RBP15.06■□□□□ 0
SFSWAP-204ENST00000535399 FUSP35637 526 aaKnown RBP eCLIP15.06■□□□□ 0
SFSWAP-204ENST00000535399 WFDC2Q14508 124 aa15.06■□□□□ 0
SFSWAP-204ENST00000535399 CLPSL2Q6UWE3 100 aa15.06■□□□□ 0
SFSWAP-204ENST00000535399 C20orf78Q9BR46 151 aa15.06■□□□□ 0
SFSWAP-204ENST00000535399 PGPEP1Q9NXJ5 209 aa15.06■□□□□ 0
SFSWAP-204ENST00000535399 KIAA1109Q2LD37 5005 aa15.05■□□□□ 0
SFSWAP-204ENST00000535399 C7orf77A4D0Y5 90 aa15.05■□□□□ -0
SFSWAP-204ENST00000535399 H7C423 109 aa15.05■□□□□ -0
SFSWAP-204ENST00000535399 TNFRSF6BO95407 300 aa15.05■□□□□ -0
SFSWAP-204ENST00000535399 PPBPP02775 128 aa15.05■□□□□ -0
SFSWAP-204ENST00000535399 MIAQ16674 131 aa15.05■□□□□ -0
SFSWAP-204ENST00000535399 NPYP01303 97 aa15.04■□□□□ -0
SFSWAP-204ENST00000535399 RPL32P62910 135 aaKnown RBP15.04■□□□□ -0
SFSWAP-204ENST00000535399 CLRN3Q8NCR9 226 aa15.04■□□□□ -0
SFSWAP-204ENST00000535399 C1orf43Q9BWL3 253 aa15.04■□□□□ -0
SFSWAP-204ENST00000535399 PHOX2AO14813 284 aa15.03■□□□□ -0
SFSWAP-204ENST00000535399 REG3AQ06141 175 aa15.03■□□□□ -0
SFSWAP-204ENST00000535399 BAALCQ8WXS3 180 aa15.03■□□□□ -0
SFSWAP-204ENST00000535399 TRAV9-1A0A075B6T8 112 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 FGF6P10767 208 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 RHEBQ15382 184 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 TMEM136Q6ZRR5 245 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 ORMDL3Q8N138 153 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 Q8N814 137 aa15.02■□□□□ -0
SFSWAP-204ENST00000535399 LECT2O14960 151 aa15.01□□□□□ -0.01
SFSWAP-204ENST00000535399 AMMECR1LQ6DCA0 310 aa15.01□□□□□ -0.01
SFSWAP-204ENST00000535399 CDPF1Q6NVV7 123 aa15.01□□□□□ -0.01
SFSWAP-204ENST00000535399 KRTAP26-1Q6PEX3 210 aa15.01□□□□□ -0.01
SFSWAP-204ENST00000535399 KIR2DL4Q99706 377 aa15.01□□□□□ -0.01
SFSWAP-204ENST00000535399 FCER1GP30273 86 aa15□□□□□ -0.01
SFSWAP-204ENST00000535399 RNASEKQ6P5S7 137 aaKnown RBP15□□□□□ -0.01
SFSWAP-204ENST00000535399 PRELID3AQ96N28 172 aa15□□□□□ -0.01
SFSWAP-204ENST00000535399 SMIM2Q9BVW6 85 aa15□□□□□ -0.01
SFSWAP-204ENST00000535399 HERC2O95714 4834 aa14.99□□□□□ -0.01
SFSWAP-204ENST00000535399 RPS10P5Q9NQ39 176 aa14.99□□□□□ -0.01
SFSWAP-204ENST00000535399 ZNF25P17030 456 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-204ENST00000535399 S100PP25815 95 aa14.98□□□□□ -0.01
SFSWAP-204ENST00000535399 MRPL52Q86TS9 123 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-204ENST00000535399 NTN5Q8WTR8 489 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-204ENST00000535399 RYR1P21817 5038 aa14.96□□□□□ -0.01
SFSWAP-204ENST00000535399 TRAV8-4A0A0B4J246 113 aa14.96□□□□□ -0.01
SFSWAP-204ENST00000535399 APOC3P02656 99 aa14.96□□□□□ -0.01
SFSWAP-204ENST00000535399 LAMTOR2Q9Y2Q5 125 aa14.96□□□□□ -0.01
SFSWAP-204ENST00000535399 IGLV10-54A0A075B6I4 117 aa14.95□□□□□ -0.02
SFSWAP-204ENST00000535399 APOBP04114 4563 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 PRSS47A8MTI9 375 aa14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 TCAPO15273 167 aa14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 HLA-DQA1P01909 254 aa14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 NDUFA5Q16718 116 aa14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 OR5A1Q8NGJ0 315 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms