RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TMEM243Q9BU79 118 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 IGLV4-60A0A075B6I1 120 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 TRAV8-4A0A0B4J246 113 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 KRTAP29-1A8MX34 341 aaPredicted RBP5.76□□□□□ -1.49
COPB1-211ENST00000534234 CTRLP40313 264 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 CLRN3Q8NCR9 226 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 PGLYRP4Q96LB8 373 aa5.76□□□□□ -1.49
COPB1-211ENST00000534234 RNASE7Q9H1E1 156 aaKnown RBP5.76□□□□□ -1.49
COPB1-211ENST00000534234 RPP21Q9H633 154 aaKnown RBP5.76□□□□□ -1.49
COPB1-211ENST00000534234 K7EN84 100 aa5.75□□□□□ -1.49
COPB1-211ENST00000534234 UBE2L6O14933 153 aa5.75□□□□□ -1.49
COPB1-211ENST00000534234 KRTAP10-4P60372 401 aaPredicted RBP5.75□□□□□ -1.49
COPB1-211ENST00000534234 COTL1Q14019 142 aa5.75□□□□□ -1.49
COPB1-211ENST00000534234 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
COPB1-211ENST00000534234 AMTP48728 403 aa5.74□□□□□ -1.49
COPB1-211ENST00000534234 Q6ZNX1 250 aa5.74□□□□□ -1.49
COPB1-211ENST00000534234 SDIM1Q6ZPB5 146 aa5.74□□□□□ -1.49
COPB1-211ENST00000534234 GATD1Q8NB37 220 aa5.74□□□□□ -1.49
COPB1-211ENST00000534234 GFRA4Q9GZZ7 299 aa5.74□□□□□ -1.49
COPB1-211ENST00000534234 TRAV26-2A0A0B4J265 109 aa5.73□□□□□ -1.49
COPB1-211ENST00000534234 hDV102S1A0JD36 115 aa5.73□□□□□ -1.49
COPB1-211ENST00000534234 BLOC1S1P78537 153 aa5.73□□□□□ -1.49
COPB1-211ENST00000534234 SMIM15Q7Z3B0 74 aa5.73□□□□□ -1.49
COPB1-211ENST00000534234 GTSF1Q8WW33 167 aa5.73□□□□□ -1.49
COPB1-211ENST00000534234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
COPB1-211ENST00000534234 TMEM250H0YL14 139 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 GATCO43716 136 aaKnown RBP5.72□□□□□ -1.49
COPB1-211ENST00000534234 FOXA3P55318 350 aaPredicted RBP5.72□□□□□ -1.49
COPB1-211ENST00000534234 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
COPB1-211ENST00000534234 ALKAL2Q6UX46 152 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 AKAP14Q86UN6 197 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 A8MWL6 223 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 PANO1I0J062 215 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 CEBPGP53567 150 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 RPL37AP61513 92 aaKnown RBP5.72□□□□□ -1.49
COPB1-211ENST00000534234 TEX261Q6UWH6 196 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
COPB1-211ENST00000534234 DPH3Q96FX2 82 aa5.72□□□□□ -1.49
COPB1-211ENST00000534234 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
COPB1-211ENST00000534234 IGKV3OR2-268A0A0C4DH90 116 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 OXTP01178 125 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 SLPIP03973 132 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 FAM231DQ6ZW35 169 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 LYPD6BQ8NI32 183 aa5.71□□□□□ -1.5
COPB1-211ENST00000534234 hCG_2014768A0A024R1R8 64 aa5.7□□□□□ -1.5
COPB1-211ENST00000534234 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
COPB1-211ENST00000534234 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
COPB1-211ENST00000534234 NCR2O95944 276 aa5.7□□□□□ -1.5
COPB1-211ENST00000534234 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
COPB1-211ENST00000534234 CFAP161Q6P656 301 aa5.7□□□□□ -1.5
COPB1-211ENST00000534234 IGHV3-64A0A075B6Q5 118 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
COPB1-211ENST00000534234 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
COPB1-211ENST00000534234 H7C423 109 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 I3L3M4 83 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 APCSP02743 223 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 FGF6P10767 208 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 PMCHP20382 165 aa5.69□□□□□ -1.5
COPB1-211ENST00000534234 EIF5A2Q9GZV4 153 aaKnown RBP5.69□□□□□ -1.5
COPB1-211ENST00000534234 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
COPB1-211ENST00000534234 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
COPB1-211ENST00000534234 CIRBPQ14011 172 aaKnown RBP5.68□□□□□ -1.5
COPB1-211ENST00000534234 CT83Q5H943 113 aa5.68□□□□□ -1.5
COPB1-211ENST00000534234 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
COPB1-211ENST00000534234 CHCHD10Q8WYQ3 142 aaPredicted RBP5.68□□□□□ -1.5
COPB1-211ENST00000534234 BORCS7Q96B45 105 aa5.68□□□□□ -1.5
COPB1-211ENST00000534234 SMIM7Q9BQ49 75 aa5.68□□□□□ -1.5
COPB1-211ENST00000534234 A0A087WYN8 130 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 GAS8-AS1O95177 125 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 RPS10P46783 165 aaKnown RBP5.67□□□□□ -1.5
COPB1-211ENST00000534234 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 BTF3L4Q96K17 158 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 ST20Q9HBF5 79 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 ZNF727A8MUV8 499 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 HIGD1CA8MV81 97 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 CHTF8P0CG12 524 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 ZNF25P17030 456 aaPredicted RBP5.67□□□□□ -1.5
COPB1-211ENST00000534234 COX6A2Q02221 97 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 RNF185Q96GF1 192 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 FAM210AQ96ND0 272 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 TMEM191AQ9H0A3 160 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 OSTCQ9NRP0 149 aa5.67□□□□□ -1.5
COPB1-211ENST00000534234 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
COPB1-211ENST00000534234 NDUFS6O75380 124 aaKnown RBP5.66□□□□□ -1.5
COPB1-211ENST00000534234 SRP19P09132 144 aaKnown RBP5.66□□□□□ -1.5
COPB1-211ENST00000534234 ESDP10768 282 aa5.66□□□□□ -1.5
COPB1-211ENST00000534234 RAB4AP20338 218 aa5.66□□□□□ -1.5
COPB1-211ENST00000534234 POLR2KP53803 58 aaKnown RBP5.66□□□□□ -1.5
COPB1-211ENST00000534234 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
COPB1-211ENST00000534234 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms