RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 MED9Q9NWA0 146 aa13.51□□□□□ -0.25
SSH3-211ENST00000534112 M0QY20 66 aa13.5□□□□□ -0.25
SSH3-211ENST00000534112 CENPWQ5EE01 88 aa13.5□□□□□ -0.25
SSH3-211ENST00000534112 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
SSH3-211ENST00000534112 FAM210AQ96ND0 272 aa13.49□□□□□ -0.25
SSH3-211ENST00000534112 IGLV4-60A0A075B6I1 120 aa13.48□□□□□ -0.25
SSH3-211ENST00000534112 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
SSH3-211ENST00000534112 RAB19A4D1S5 217 aa13.48□□□□□ -0.25
SSH3-211ENST00000534112 GFRA4Q9GZZ7 299 aa13.48□□□□□ -0.25
SSH3-211ENST00000534112 PLAC8Q9NZF1 115 aa13.48□□□□□ -0.25
SSH3-211ENST00000534112 TRBV20OR9-2A0A075B6H5 130 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 TMEM250H0YL14 139 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 PHOX2AO14813 284 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 GZMBP10144 247 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 SMIM12Q96EX1 92 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 TMEM243Q9BU79 118 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 DPH3P1Q9H4G8 78 aa13.47□□□□□ -0.25
SSH3-211ENST00000534112 H7C1H1 209 aa13.46□□□□□ -0.25
SSH3-211ENST00000534112 NDUFS6O75380 124 aaKnown RBP13.46□□□□□ -0.25
SSH3-211ENST00000534112 MGPP08493 103 aa13.46□□□□□ -0.25
SSH3-211ENST00000534112 GNG4P50150 75 aa13.46□□□□□ -0.25
SSH3-211ENST00000534112 EIF5A2Q9GZV4 153 aaKnown RBP13.46□□□□□ -0.25
SSH3-211ENST00000534112 SUMO4Q6EEV6 95 aa13.45□□□□□ -0.26
SSH3-211ENST00000534112 C7orf33Q8WU49 177 aa13.45□□□□□ -0.26
SSH3-211ENST00000534112 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
SSH3-211ENST00000534112 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
SSH3-211ENST00000534112 COX6A2Q02221 97 aa13.42□□□□□ -0.26
SSH3-211ENST00000534112 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
SSH3-211ENST00000534112 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
SSH3-211ENST00000534112 WDR73Q6P4I2 378 aa13.41□□□□□ -0.26
SSH3-211ENST00000534112 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
SSH3-211ENST00000534112 C15orf56Q8N910 161 aa13.41□□□□□ -0.26
SSH3-211ENST00000534112 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
SSH3-211ENST00000534112 C19orf71A6NCJ1 209 aa13.4□□□□□ -0.26
SSH3-211ENST00000534112 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
SSH3-211ENST00000534112 GTSF1Q8WW33 167 aa13.4□□□□□ -0.26
SSH3-211ENST00000534112 PGLYRP4Q96LB8 373 aa13.4□□□□□ -0.26
SSH3-211ENST00000534112 BIN3Q9NQY0 253 aa13.4□□□□□ -0.26
SSH3-211ENST00000534112 GAGE12HA6NDE8 117 aa13.39□□□□□ -0.27
SSH3-211ENST00000534112 UBE2L6O14933 153 aa13.39□□□□□ -0.27
SSH3-211ENST00000534112 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
SSH3-211ENST00000534112 CEBPGP53567 150 aa13.39□□□□□ -0.27
SSH3-211ENST00000534112 ODF1Q14990 250 aa13.39□□□□□ -0.27
SSH3-211ENST00000534112 MAJINQ3KP22 176 aa13.39□□□□□ -0.27
SSH3-211ENST00000534112 K7EN84 100 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 CACNG7P62955 275 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
SSH3-211ENST00000534112 IFITM2Q01629 132 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 OR2D3Q8NGH3 330 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 PRSS3P2Q8NHM4 247 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 OCC1Q8TAD7 63 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 NIT2Q9NQR4 276 aa13.38□□□□□ -0.27
SSH3-211ENST00000534112 IGKV2-24A0A0C4DH68 120 aa13.37□□□□□ -0.27
SSH3-211ENST00000534112 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
SSH3-211ENST00000534112 SMIM7Q9BQ49 75 aa13.37□□□□□ -0.27
SSH3-211ENST00000534112 C9JQL5 133 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 AMTP48728 403 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 RAB14P61106 215 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 SRSF3P84103 164 aaKnown RBP13.36□□□□□ -0.27
SSH3-211ENST00000534112 COTL1Q14019 142 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 PEA15Q15121 130 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 HIGD2BQ4VC39 106 aa13.36□□□□□ -0.27
SSH3-211ENST00000534112 IGKV3OR2-268A0A0C4DH90 116 aa13.35□□□□□ -0.27
SSH3-211ENST00000534112 STPG4Q8N801 248 aa13.35□□□□□ -0.27
SSH3-211ENST00000534112 SMDT1Q9H4I9 107 aa13.35□□□□□ -0.27
SSH3-211ENST00000534112 ZNF727A8MUV8 499 aa13.34□□□□□ -0.27
SSH3-211ENST00000534112 F2Z2F3 143 aa13.34□□□□□ -0.27
SSH3-211ENST00000534112 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
SSH3-211ENST00000534112 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
SSH3-211ENST00000534112 A0A0J9YXV3 536 aa13.33□□□□□ -0.28
SSH3-211ENST00000534112 TRGC1P0CF51 173 aa13.33□□□□□ -0.28
SSH3-211ENST00000534112 CLLU1Q5K131 121 aa13.33□□□□□ -0.28
SSH3-211ENST00000534112 KRTAP10-8P60410 259 aa13.32□□□□□ -0.28
SSH3-211ENST00000534112 LYZL1Q6UWQ5 148 aa13.32□□□□□ -0.28
SSH3-211ENST00000534112 CHCHD10Q8WYQ3 142 aaPredicted RBP13.32□□□□□ -0.28
SSH3-211ENST00000534112 RNASE7Q9H1E1 156 aaKnown RBP13.32□□□□□ -0.28
SSH3-211ENST00000534112 XKRY2A2RUG3 117 aa13.31□□□□□ -0.28
SSH3-211ENST00000534112 NTF3P20783 257 aa13.31□□□□□ -0.28
SSH3-211ENST00000534112 FAM74A3Q4VXF1 159 aa13.31□□□□□ -0.28
SSH3-211ENST00000534112 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
SSH3-211ENST00000534112 GVQW2A0A096LPI5 108 aaPredicted RBP13.3□□□□□ -0.28
SSH3-211ENST00000534112 FAM231DQ6ZW35 169 aa13.3□□□□□ -0.28
SSH3-211ENST00000534112 RPP21Q9H633 154 aaKnown RBP13.3□□□□□ -0.28
SSH3-211ENST00000534112 A0A096LNI7 61 aa13.29□□□□□ -0.28
SSH3-211ENST00000534112 SPINK6Q6UWN8 80 aa13.29□□□□□ -0.28
SSH3-211ENST00000534112 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
SSH3-211ENST00000534112 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
SSH3-211ENST00000534112 TMEM241Q24JQ0 296 aa13.27□□□□□ -0.29
SSH3-211ENST00000534112 REG3GQ6UW15 175 aa13.27□□□□□ -0.29
SSH3-211ENST00000534112 GATD1Q8NB37 220 aa13.27□□□□□ -0.29
SSH3-211ENST00000534112 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.29
SSH3-211ENST00000534112 FOXI1Q12951 378 aa13.26□□□□□ -0.29
SSH3-211ENST00000534112 RNASEKQ6P5S7 137 aaKnown RBP13.26□□□□□ -0.29
SSH3-211ENST00000534112 NAT8Q9UHE5 227 aa13.26□□□□□ -0.29
SSH3-211ENST00000534112 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
SSH3-211ENST00000534112 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
SSH3-211ENST00000534112 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.29
SSH3-211ENST00000534112 TWIST1Q15672 202 aa13.25□□□□□ -0.29
SSH3-211ENST00000534112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
SSH3-211ENST00000534112 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms