RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
SSH3-209ENST00000532600 NIT1Q86X76 327 aa12.54□□□□□ -0.4
SSH3-209ENST00000532600 RPL39LQ96EH5 51 aaKnown RBP12.54□□□□□ -0.4
SSH3-209ENST00000532600 HBBP68871 147 aa12.53□□□□□ -0.4
SSH3-209ENST00000532600 FAM30AQ9NZY2 134 aa12.53□□□□□ -0.4
SSH3-209ENST00000532600 RHEBQ15382 184 aa12.52□□□□□ -0.41
SSH3-209ENST00000532600 IMMP2LQ96T52 175 aa12.52□□□□□ -0.41
SSH3-209ENST00000532600 A0A1B0GW15 77 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 SMKR1H3BMG3 65 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 H7C1H1 209 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
SSH3-209ENST00000532600 RPS10P46783 165 aaKnown RBP12.51□□□□□ -0.41
SSH3-209ENST00000532600 Q5VSD8 79 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 ATP5L2Q7Z4Y8 100 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 RPS10P5Q9NQ39 176 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
SSH3-209ENST00000532600 TRAV8-3A0A0A6YYJ7 113 aa12.5□□□□□ -0.41
SSH3-209ENST00000532600 LECT2O14960 151 aa12.5□□□□□ -0.41
SSH3-209ENST00000532600 MRPL51Q4U2R6 128 aaKnown RBP12.5□□□□□ -0.41
SSH3-209ENST00000532600 ATRAIDQ6UW56 229 aa12.5□□□□□ -0.41
SSH3-209ENST00000532600 TMEM242Q9NWH2 141 aa12.5□□□□□ -0.41
SSH3-209ENST00000532600 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
SSH3-209ENST00000532600 NCR2O95944 276 aa12.49□□□□□ -0.41
SSH3-209ENST00000532600 NTM-AS1Q6ZSK4 140 aa12.49□□□□□ -0.41
SSH3-209ENST00000532600 SVBPQ8N300 66 aa12.49□□□□□ -0.41
SSH3-209ENST00000532600 BTF3L4Q96K17 158 aa12.49□□□□□ -0.41
SSH3-209ENST00000532600 TMEM70Q9BUB7 260 aa12.49□□□□□ -0.41
SSH3-209ENST00000532600 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 KLK12Q9UKR0 248 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 URGCP-MRPS24S4R325 110 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 HERC1Q15751 4861 aa12.48□□□□□ -0.41
SSH3-209ENST00000532600 NRACQ8N912 160 aa12.47□□□□□ -0.41
SSH3-209ENST00000532600 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.41
SSH3-209ENST00000532600 SNAPINO95295 136 aa12.46□□□□□ -0.41
SSH3-209ENST00000532600 S100A8P05109 93 aa12.46□□□□□ -0.41
SSH3-209ENST00000532600 FRZBQ92765 325 aa12.46□□□□□ -0.41
SSH3-209ENST00000532600 TRBV6-8A0A0A6YYG3 113 aa12.45□□□□□ -0.42
SSH3-209ENST00000532600 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
SSH3-209ENST00000532600 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
SSH3-209ENST00000532600 MYCBP2O75592 4640 aa12.45□□□□□ -0.42
SSH3-209ENST00000532600 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
SSH3-209ENST00000532600 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
SSH3-209ENST00000532600 Q6ZSA8 131 aa12.44□□□□□ -0.42
SSH3-209ENST00000532600 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
SSH3-209ENST00000532600 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.43□□□□□ -0.42
SSH3-209ENST00000532600 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
SSH3-209ENST00000532600 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
SSH3-209ENST00000532600 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
SSH3-209ENST00000532600 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
SSH3-209ENST00000532600 A0A087WX48 190 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 D6R8Y8 96 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 S100PP25815 95 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
SSH3-209ENST00000532600 CKS2P33552 79 aa12.41□□□□□ -0.42
SSH3-209ENST00000532600 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
SSH3-209ENST00000532600 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
SSH3-209ENST00000532600 ST20Q9HBF5 79 aa12.41□□□□□ -0.42
SSH3-209ENST00000532600 FLG2Q5D862 2391 aaPredicted RBP12.4□□□□□ -0.42
SSH3-209ENST00000532600 TGIF2-C20orf24A0A0A6YYL0 155 aa12.4□□□□□ -0.42
SSH3-209ENST00000532600 IQCJQ1A5X6 159 aa12.4□□□□□ -0.42
SSH3-209ENST00000532600 RMI2Q96E14 147 aa12.4□□□□□ -0.42
SSH3-209ENST00000532600 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
SSH3-209ENST00000532600 NPYP01303 97 aa12.39□□□□□ -0.43
SSH3-209ENST00000532600 ELOBQ15370 118 aa12.39□□□□□ -0.43
SSH3-209ENST00000532600 Q8N976 141 aa12.39□□□□□ -0.43
SSH3-209ENST00000532600 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
SSH3-209ENST00000532600 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
SSH3-209ENST00000532600 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
SSH3-209ENST00000532600 TSHBP01222 138 aa12.38□□□□□ -0.43
SSH3-209ENST00000532600 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
SSH3-209ENST00000532600 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
SSH3-209ENST00000532600 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
SSH3-209ENST00000532600 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
SSH3-209ENST00000532600 TRBV25-1A0A075B6N4 114 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 COTL1Q14019 142 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 CBLN2Q8IUK8 224 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 CHCHD5Q9BSY4 110 aa12.37□□□□□ -0.43
SSH3-209ENST00000532600 I3L3M4 83 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 PPBPP02775 128 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 PMCHP20382 165 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 Q0VG73 95 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 GAGE6Q13070 117 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
SSH3-209ENST00000532600 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 PPP1R17O96001 155 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 AMTP48728 403 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 C20orf78Q9BR46 151 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 TMEM243Q9BU79 118 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 GNB1LQ9BYB4 327 aa12.35□□□□□ -0.43
SSH3-209ENST00000532600 VCYO14598 125 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms