RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
SNHG9-201ENST00000531523 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
SNHG9-201ENST00000531523 SLPIP03973 132 aa9.55□□□□□ -0.88
SNHG9-201ENST00000531523 CNBPP62633 177 aaKnown RBP9.55□□□□□ -0.88
SNHG9-201ENST00000531523 CIRBPQ14011 172 aaKnown RBP9.55□□□□□ -0.88
SNHG9-201ENST00000531523 WDR73Q6P4I2 378 aa9.55□□□□□ -0.88
SNHG9-201ENST00000531523 RNASE7Q9H1E1 156 aaKnown RBP9.55□□□□□ -0.88
SNHG9-201ENST00000531523 HMCN2Q8NDA2 5059 aa9.55□□□□□ -0.88
SNHG9-201ENST00000531523 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
SNHG9-201ENST00000531523 GTSF1Q8WW33 167 aa9.54□□□□□ -0.88
SNHG9-201ENST00000531523 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
SNHG9-201ENST00000531523 BIN3Q9NQY0 253 aa9.54□□□□□ -0.88
SNHG9-201ENST00000531523 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
SNHG9-201ENST00000531523 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
SNHG9-201ENST00000531523 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
SNHG9-201ENST00000531523 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
SNHG9-201ENST00000531523 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
SNHG9-201ENST00000531523 OXTP01178 125 aa9.52□□□□□ -0.89
SNHG9-201ENST00000531523 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
SNHG9-201ENST00000531523 AMTP48728 403 aa9.51□□□□□ -0.89
SNHG9-201ENST00000531523 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
SNHG9-201ENST00000531523 COTL1Q14019 142 aa9.51□□□□□ -0.89
SNHG9-201ENST00000531523 TWIST1Q15672 202 aa9.51□□□□□ -0.89
SNHG9-201ENST00000531523 Q6ZNX1 250 aa9.51□□□□□ -0.89
SNHG9-201ENST00000531523 C15orf56Q8N910 161 aa9.51□□□□□ -0.89
SNHG9-201ENST00000531523 RPL39LQ96EH5 51 aaKnown RBP9.51□□□□□ -0.89
SNHG9-201ENST00000531523 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
SNHG9-201ENST00000531523 LYPD6BQ8NI32 183 aa9.5□□□□□ -0.89
SNHG9-201ENST00000531523 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
SNHG9-201ENST00000531523 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
SNHG9-201ENST00000531523 SPACA4Q8TDM5 124 aa9.48□□□□□ -0.89
SNHG9-201ENST00000531523 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
SNHG9-201ENST00000531523 UBE2L6O14933 153 aa9.47□□□□□ -0.89
SNHG9-201ENST00000531523 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
SNHG9-201ENST00000531523 ALKAL2Q6UX46 152 aa9.47□□□□□ -0.89
SNHG9-201ENST00000531523 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.9
SNHG9-201ENST00000531523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.46□□□□□ -0.9
SNHG9-201ENST00000531523 IGKV2-29A2NJV5 120 aaPredicted RBP9.46□□□□□ -0.9
SNHG9-201ENST00000531523 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
SNHG9-201ENST00000531523 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
SNHG9-201ENST00000531523 NCR2O95944 276 aa9.46□□□□□ -0.9
SNHG9-201ENST00000531523 A0A087WYN8 130 aa9.45□□□□□ -0.9
SNHG9-201ENST00000531523 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
SNHG9-201ENST00000531523 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
SNHG9-201ENST00000531523 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
SNHG9-201ENST00000531523 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
SNHG9-201ENST00000531523 CT83Q5H943 113 aa9.44□□□□□ -0.9
SNHG9-201ENST00000531523 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
SNHG9-201ENST00000531523 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
SNHG9-201ENST00000531523 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 H7C423 109 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 APCSP02743 223 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 FGF6P10767 208 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 ESDP10768 282 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 FOXI1Q12951 378 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 PLAC8Q9NZF1 115 aa9.43□□□□□ -0.9
SNHG9-201ENST00000531523 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
SNHG9-201ENST00000531523 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
SNHG9-201ENST00000531523 A8MWL6 223 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 TSHBP01222 138 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 BLOC1S1P78537 153 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 TNXBP22105 4242 aa9.42□□□□□ -0.9
SNHG9-201ENST00000531523 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
SNHG9-201ENST00000531523 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
SNHG9-201ENST00000531523 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
SNHG9-201ENST00000531523 I3L3M4 83 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
SNHG9-201ENST00000531523 ZNF25P17030 456 aaPredicted RBP9.4□□□□□ -0.9
SNHG9-201ENST00000531523 COX6A2Q02221 97 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
SNHG9-201ENST00000531523 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
SNHG9-201ENST00000531523 hCG_2014768A0A024R1R8 64 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
SNHG9-201ENST00000531523 CFAP161Q6P656 301 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 Q6ZRU5 148 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
SNHG9-201ENST00000531523 PHOX2AO14813 284 aa9.38□□□□□ -0.91
SNHG9-201ENST00000531523 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
SNHG9-201ENST00000531523 CEBPGP53567 150 aa9.38□□□□□ -0.91
SNHG9-201ENST00000531523 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
SNHG9-201ENST00000531523 SMIM7Q9BQ49 75 aa9.38□□□□□ -0.91
SNHG9-201ENST00000531523 V9GYV3 84 aa9.38□□□□□ -0.91
SNHG9-201ENST00000531523 A0A096LNI7 61 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 TRBV27A0A0K0K1C4 114 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 LINC00959A0A1B0GUT2 108 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 RAB4AP20338 218 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 PMCHP20382 165 aa9.37□□□□□ -0.91
SNHG9-201ENST00000531523 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
SNHG9-201ENST00000531523 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms