RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	LRP1	Q07954	4544 aa	Known RBP	8.68	□□□□□ -1.02
ABCA7-214	ENST00000531467	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	8.68	□□□□□ -1.02
ABCA7-214	ENST00000531467	ZNF727	A8MUV8	499 aa		8.68	□□□□□ -1.02
ABCA7-214	ENST00000531467	LINC01551	Q86U37	167 aa		8.68	□□□□□ -1.02
ABCA7-214	ENST00000531467	FOXA3	P55318	350 aa	Predicted RBP	8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	MIA	Q16674	131 aa		8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	SMIM15	Q7Z3B0	74 aa		8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	GATD1	Q8NB37	220 aa		8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	PGLYRP4	Q96LB8	373 aa		8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	PRR34	Q9NV39	138 aa		8.67	□□□□□ -1.02
ABCA7-214	ENST00000531467	TRAV26-2	A0A0B4J265	109 aa		8.66	□□□□□ -1.02
ABCA7-214	ENST00000531467	LINC00269	Q8N2A0	174 aa		8.66	□□□□□ -1.02
ABCA7-214	ENST00000531467	TMEM243	Q9BU79	118 aa		8.66	□□□□□ -1.02
ABCA7-214	ENST00000531467	OXT	P01178	125 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467	COTL1	Q14019	142 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467	CLPSL2	Q6UWE3	100 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467		Q6ZSA8	131 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467	TSKU	Q8WUA8	353 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467	GFRA4	Q9GZZ7	299 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467	OSTC	Q9NRP0	149 aa		8.65	□□□□□ -1.02
ABCA7-214	ENST00000531467		A0A1B0GUV1	79 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	HIGD1C	A8MV81	97 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	C14orf177	Q52M58	125 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	TEX261	Q6UWH6	196 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	C20orf203	Q8NBC4	194 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	BORCS7	Q96B45	105 aa		8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	RPL39L	Q96EH5	51 aa	Known RBP	8.64	□□□□□ -1.03
ABCA7-214	ENST00000531467	FAM231B	A6NCW3	169 aa		8.63	□□□□□ -1.03
ABCA7-214	ENST00000531467	HLA-DQA1	P01909	254 aa		8.63	□□□□□ -1.03
ABCA7-214	ENST00000531467	AMT	P48728	403 aa		8.63	□□□□□ -1.03
ABCA7-214	ENST00000531467	FAM74A3	Q4VXF1	159 aa		8.63	□□□□□ -1.03
ABCA7-214	ENST00000531467	IGLV4-60	A0A075B6I1	120 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467		A0A1B0GUT8	65 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467		C9JQL5	133 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	UBE2L6	O14933	153 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	REG3A	Q06141	175 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	TMEM241	Q24JQ0	296 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	LINC01620	Q4KN68	170 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	KRTAP26-1	Q6PEX3	210 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	ISOC2	Q96AB3	205 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467		V9GYV3	84 aa		8.62	□□□□□ -1.03
ABCA7-214	ENST00000531467	USP17L23	D6RBM5	183 aa		8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	NCR2	O95944	276 aa		8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	RPL23	P62829	140 aa	Known RBP	8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	SRSF3	P84103	164 aa	Known RBP	8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	PEA15	Q15121	130 aa		8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	TMEM191A	Q9H0A3	160 aa		8.61	□□□□□ -1.03
ABCA7-214	ENST00000531467	FAT3	Q8TDW7	4589 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	TRAV8-4	A0A0B4J246	113 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	TRBV6-5	A0A0K0K1A5	114 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	SDHAF1	A6NFY7	115 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	SMDT1	Q9H4I9	107 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	NAT8	Q9UHE5	227 aa		8.6	□□□□□ -1.03
ABCA7-214	ENST00000531467	IGLV10-54	A0A075B6I4	117 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	GAS8-AS1	O95177	125 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	KRTAP10-4	P60372	401 aa	Predicted RBP	8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	ADIRF	Q15847	76 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	SCX	Q7RTU7	201 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	NUP35	Q8NFH5	326 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467	RNF185	Q96GF1	192 aa		8.59	□□□□□ -1.03
ABCA7-214	ENST00000531467		I3L3M4	83 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467	APCS	P02743	223 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467	PRSS1	P07477	247 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467	RAB4A	P20338	218 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467	RIG	Q13278	110 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467	NAT8B	Q9UHF3	227 aa		8.58	□□□□□ -1.04
ABCA7-214	ENST00000531467		H7C423	109 aa		8.57	□□□□□ -1.04
ABCA7-214	ENST00000531467	AMN1	Q8IY45	258 aa		8.57	□□□□□ -1.04
ABCA7-214	ENST00000531467	MRAP2	Q96G30	205 aa		8.57	□□□□□ -1.04
ABCA7-214	ENST00000531467	ST20	Q9HBF5	79 aa		8.57	□□□□□ -1.04
ABCA7-214	ENST00000531467	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	IGKV2-29	A2NJV5	120 aa	Predicted RBP	8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	PMCH	P20382	165 aa		8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	RPS10	P46783	165 aa	Known RBP	8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	AMMECR1L	Q6DCA0	310 aa		8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	CLRN3	Q8NCR9	226 aa		8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	CHAC1	Q9BUX1	264 aa		8.56	□□□□□ -1.04
ABCA7-214	ENST00000531467	SMIM27	A0A1W2PRY6	76 aa		8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	TSHB	P01222	138 aa		8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	FGF6	P10767	208 aa		8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	POLR2K	P53803	58 aa	Known RBP	8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	DGAT2L7P	Q6IED9	249 aa		8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	RNASEK	Q6P5S7	137 aa	Known RBP	8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	TMEM242	Q9NWH2	141 aa		8.55	□□□□□ -1.04
ABCA7-214	ENST00000531467	IGKV3OR2-268	A0A0C4DH90	116 aa		8.54	□□□□□ -1.04
ABCA7-214	ENST00000531467	TRBV27	A0A0K0K1C4	114 aa		8.54	□□□□□ -1.04
ABCA7-214	ENST00000531467	ESD	P10768	282 aa		8.54	□□□□□ -1.04
ABCA7-214	ENST00000531467	ZNF25	P17030	456 aa	Predicted RBP	8.54	□□□□□ -1.04
ABCA7-214	ENST00000531467	CIRBP-AS1	Q8TBR5	109 aa		8.54	□□□□□ -1.04
ABCA7-214	ENST00000531467	SMKR1	H3BMG3	65 aa		8.53	□□□□□ -1.04
ABCA7-214	ENST00000531467	PPP1R17	O96001	155 aa		8.53	□□□□□ -1.04
ABCA7-214	ENST00000531467	C9orf163	Q8N9P6	203 aa		8.53	□□□□□ -1.04
ABCA7-214	ENST00000531467	hDV102S1	A0JD36	115 aa		8.52	□□□□□ -1.05
ABCA7-214	ENST00000531467	GAGE12H	A6NDE8	117 aa		8.52	□□□□□ -1.05
ABCA7-214	ENST00000531467	CNBP	P62633	177 aa	Known RBP	8.52	□□□□□ -1.05
ABCA7-214	ENST00000531467	FAM104B	Q5XKR9	115 aa		8.52	□□□□□ -1.05
ABCA7-214	ENST00000531467	NRAC	Q8N912	160 aa		8.52	□□□□□ -1.05
ABCA7-214	ENST00000531467		A0A1B0GW15	77 aa		8.51	□□□□□ -1.05
ABCA7-214	ENST00000531467	C7orf77	A4D0Y5	90 aa		8.51	□□□□□ -1.05
ABCA7-214	ENST00000531467	VCY	O14598	125 aa		8.51	□□□□□ -1.05

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