RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NIT2Q9NQR4 276 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 GAGE12HA6NDE8 117 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 AMTP48728 403 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 WDR73Q6P4I2 378 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 LYZL1Q6UWQ5 148 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 PLAC8Q9NZF1 115 aa11.64□□□□□ -0.55
SSSCA1-206ENST00000531405 COX6A2Q02221 97 aa11.63□□□□□ -0.55
SSSCA1-206ENST00000531405 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
SSSCA1-206ENST00000531405 RNF213Q63HN8 5207 aa11.63□□□□□ -0.55
SSSCA1-206ENST00000531405 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 TRGC1P0CF51 173 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 NTF3P20783 257 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 GNG4P50150 75 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 COTL1Q14019 142 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
SSSCA1-206ENST00000531405 F2Z2F3 143 aa11.61□□□□□ -0.55
SSSCA1-206ENST00000531405 IFNA1P01562 189 aa11.61□□□□□ -0.55
SSSCA1-206ENST00000531405 TRBV20OR9-2A0A075B6H5 130 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 IGKV2-24A0A0C4DH68 120 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 XKRY2A2RUG3 117 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 Q6ZNX1 250 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
SSSCA1-206ENST00000531405 TRAV26-2A0A0B4J265 109 aa11.59□□□□□ -0.55
SSSCA1-206ENST00000531405 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
SSSCA1-206ENST00000531405 ODF1Q14990 250 aa11.59□□□□□ -0.55
SSSCA1-206ENST00000531405 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
SSSCA1-206ENST00000531405 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 CTRLP40313 264 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 EIF5AP63241 154 aaKnown RBP11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 GTSF1Q8WW33 167 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 SMIM12Q96EX1 92 aa11.58□□□□□ -0.56
SSSCA1-206ENST00000531405 NDUFS6O75380 124 aaKnown RBP11.57□□□□□ -0.56
SSSCA1-206ENST00000531405 TWIST1Q15672 202 aa11.57□□□□□ -0.56
SSSCA1-206ENST00000531405 C9orf62Q8N4C0 152 aa11.57□□□□□ -0.56
SSSCA1-206ENST00000531405 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
SSSCA1-206ENST00000531405 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
SSSCA1-206ENST00000531405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 IGKV2-29A2NJV5 120 aaPredicted RBP11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 MEF2BQ02080 365 aaPredicted RBP11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 AMMECR1LQ6DCA0 310 aa11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 STPG4Q8N801 248 aa11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 NUDT10Q8NFP7 164 aa11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
SSSCA1-206ENST00000531405 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
SSSCA1-206ENST00000531405 A0A096LNI7 61 aa11.54□□□□□ -0.56
SSSCA1-206ENST00000531405 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
SSSCA1-206ENST00000531405 PDE6DO43924 150 aa11.54□□□□□ -0.56
SSSCA1-206ENST00000531405 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
SSSCA1-206ENST00000531405 FOXA3P55318 350 aaPredicted RBP11.53□□□□□ -0.56
SSSCA1-206ENST00000531405 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
SSSCA1-206ENST00000531405 RNASE7Q9H1E1 156 aaKnown RBP11.53□□□□□ -0.56
SSSCA1-206ENST00000531405 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
SSSCA1-206ENST00000531405 TEX46H3BTG2 121 aa11.52□□□□□ -0.57
SSSCA1-206ENST00000531405 FOXI1Q12951 378 aa11.52□□□□□ -0.57
SSSCA1-206ENST00000531405 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
SSSCA1-206ENST00000531405 K7EN84 100 aa11.51□□□□□ -0.57
SSSCA1-206ENST00000531405 APCSP02743 223 aa11.51□□□□□ -0.57
SSSCA1-206ENST00000531405 BCL2P10415 239 aa11.51□□□□□ -0.57
SSSCA1-206ENST00000531405 FGF6P10767 208 aa11.51□□□□□ -0.57
SSSCA1-206ENST00000531405 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
SSSCA1-206ENST00000531405 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
SSSCA1-206ENST00000531405 NCR2O95944 276 aa11.5□□□□□ -0.57
SSSCA1-206ENST00000531405 XCL1P47992 114 aa11.5□□□□□ -0.57
SSSCA1-206ENST00000531405 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
SSSCA1-206ENST00000531405 H7C423 109 aa11.48□□□□□ -0.57
SSSCA1-206ENST00000531405 OR5A1Q8NGJ0 315 aa11.48□□□□□ -0.57
SSSCA1-206ENST00000531405 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
SSSCA1-206ENST00000531405 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
SSSCA1-206ENST00000531405 FAM231BA6NCW3 169 aa11.47□□□□□ -0.57
SSSCA1-206ENST00000531405 CCL25O15444 150 aa11.47□□□□□ -0.57
SSSCA1-206ENST00000531405 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
SSSCA1-206ENST00000531405 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
SSSCA1-206ENST00000531405 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
SSSCA1-206ENST00000531405 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
SSSCA1-206ENST00000531405 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
SSSCA1-206ENST00000531405 ZNF25P17030 456 aaPredicted RBP11.45□□□□□ -0.58
SSSCA1-206ENST00000531405 PMCHP20382 165 aa11.45□□□□□ -0.58
SSSCA1-206ENST00000531405 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 I3L3M4 83 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 BTF3L4Q96K17 158 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
SSSCA1-206ENST00000531405 TSHBP01222 138 aa11.43□□□□□ -0.58
SSSCA1-206ENST00000531405 TMEM242Q9NWH2 141 aa11.43□□□□□ -0.58
SSSCA1-206ENST00000531405 ESDP10768 282 aa11.42□□□□□ -0.58
SSSCA1-206ENST00000531405 REG3GQ6UW15 175 aa11.42□□□□□ -0.58
SSSCA1-206ENST00000531405 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
SSSCA1-206ENST00000531405 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
SSSCA1-206ENST00000531405 SYCNQ0VAF6 134 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms