RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
PCDHA4-203ENST00000530339 NRGNQ92686 78 aa11.65□□□□□ -0.55
PCDHA4-203ENST00000530339 HIVEP2P31629 2446 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 RPL18AQ02543 176 aaKnown RBP11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 MUC22E2RYF6 1773 aaPredicted RBP11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 SHISA2Q6UWI4 295 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 PRO0255Q9UI72 69 aa11.64□□□□□ -0.55
PCDHA4-203ENST00000530339 C10orf142B7Z368 130 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 TMEM256-PLSCR3K7ERE1 68 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 DEFB105AQ8NG35 78 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 IGHV4-4A0A075B6R2 117 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 P0DMU3 169 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
PCDHA4-203ENST00000530339 TMEM223A0PJW6 202 aa11.62□□□□□ -0.55
PCDHA4-203ENST00000530339 K7EQG2 157 aa11.62□□□□□ -0.55
PCDHA4-203ENST00000530339 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
PCDHA4-203ENST00000530339 NREPQ16612 68 aa11.62□□□□□ -0.55
PCDHA4-203ENST00000530339 Q8N976 141 aa11.62□□□□□ -0.55
PCDHA4-203ENST00000530339 C14orf132Q9NPU4 83 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 UQCRQO14949 82 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
PCDHA4-203ENST00000530339 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
PCDHA4-203ENST00000530339 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
PCDHA4-203ENST00000530339 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
PCDHA4-203ENST00000530339 Q6YL49 198 aa11.6□□□□□ -0.55
PCDHA4-203ENST00000530339 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
PCDHA4-203ENST00000530339 IGHV3-30P01768 117 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 IGHV3-30-5P0DP03 117 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 PRO3102Q9H379 93 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 HCFC1P51610 2035 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 TRIAP1O43715 76 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 DEFB135Q30KP9 77 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 SPATA25Q9BR10 227 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
PCDHA4-203ENST00000530339 NCR3O14931 201 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 CFAP126Q5VTH2 177 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 ATRXP46100 2492 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 CSPG4Q6UVK1 2322 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 C22orf34Q6ZV56 151 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 NRACQ8N912 160 aa11.58□□□□□ -0.56
PCDHA4-203ENST00000530339 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
PCDHA4-203ENST00000530339 UBE2AP49459 152 aa11.57□□□□□ -0.56
PCDHA4-203ENST00000530339 NDUFC2O95298 119 aa11.57□□□□□ -0.56
PCDHA4-203ENST00000530339 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
PCDHA4-203ENST00000530339 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
PCDHA4-203ENST00000530339 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 M0QY20 66 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 NDUFB1O75438 58 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 TECTAO75443 2155 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 TRBV6-5A0A0K0K1A5 114 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 C11orf45Q8TAV5 145 aa11.56□□□□□ -0.56
PCDHA4-203ENST00000530339 HILS1P60008 231 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 LINC00467Q9BRT7 94 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 NDUFS5O43920 106 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 UFSP1Q6NVU6 142 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 IGHV4-28A0A0C4DH34 117 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 URB1-AS1Q96HZ7 61 aa11.55□□□□□ -0.56
PCDHA4-203ENST00000530339 Q8N6K4 173 aa11.54□□□□□ -0.56
PCDHA4-203ENST00000530339 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
PCDHA4-203ENST00000530339 MP68P56378 58 aa11.54□□□□□ -0.56
PCDHA4-203ENST00000530339 MRPS12O15235 138 aaKnown RBP11.53□□□□□ -0.56
PCDHA4-203ENST00000530339 DEFB114Q30KQ6 69 aa11.53□□□□□ -0.56
PCDHA4-203ENST00000530339 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
PCDHA4-203ENST00000530339 TRAV23DV6A0A075B6W5 121 aa11.53□□□□□ -0.56
PCDHA4-203ENST00000530339 C3orf22Q8N5N4 141 aa11.52□□□□□ -0.56
PCDHA4-203ENST00000530339 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.56
PCDHA4-203ENST00000530339 CNFNQ9BYD5 112 aa11.52□□□□□ -0.56
PCDHA4-203ENST00000530339 TIMM17BO60830 172 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 ZNF843Q8N446 348 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 TANC2Q9HCD6 1990 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 UPK3BQ9BT76 320 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 IBA57-AS1B1ANH7 110 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 COX7BP24311 80 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 ATP5EP2Q5VTU8 51 aa11.51□□□□□ -0.57
PCDHA4-203ENST00000530339 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 CACNA1AO00555 2505 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 XGP55808 180 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 NAV3Q8IVL0 2385 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 CUL9Q8IWT3 2517 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 ATG2AQ2TAZ0 1938 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 Q6ZTI0 123 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 C20orf197Q8N268 126 aa11.5□□□□□ -0.57
PCDHA4-203ENST00000530339 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms