RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 UBE2L6O14933 153 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 MBP02144 154 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 IGLV7-43P04211 117 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 SMIM17P0DL12 118 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 AKAP14Q86UN6 197 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 PGLYRP4Q96LB8 373 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 CARD19Q96LW7 228 aa7□□□□□ -1.29
AMBRA1-207ENST00000529553 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 M0QY20 66 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 SNAI2O43623 268 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 ATP6V0CP27449 155 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 SPANXN1Q5VSR9 72 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 FMC1Q96HJ9 113 aa6.99□□□□□ -1.29
AMBRA1-207ENST00000529553 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
AMBRA1-207ENST00000529553 AMTP48728 403 aa6.98□□□□□ -1.29
AMBRA1-207ENST00000529553 FOXI1Q12951 378 aa6.98□□□□□ -1.29
AMBRA1-207ENST00000529553 PSMG3Q9BT73 122 aaPredicted RBP6.98□□□□□ -1.29
AMBRA1-207ENST00000529553 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 BCL2L11O43521 198 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 LTAP01374 205 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 UBE2D1P51668 147 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 SERF2P84101 59 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 TMUB2Q71RG4 321 aa6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 ACTR3CQ9C0K3 210 aaPredicted RBP6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
AMBRA1-207ENST00000529553 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 FGF6P10767 208 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 UBE2G1P62253 170 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 GAGE2BQ13066 116 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 ISOC2Q96AB3 205 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 AP1S3Q96PC3 154 aa6.96□□□□□ -1.3
AMBRA1-207ENST00000529553 BORCS7-ASMTA0A0B4J1R7 106 aa6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 NKX2-5P52952 324 aaPredicted RBP6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 COTL1Q14019 142 aa6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 TSKUQ8WUA8 353 aa6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
AMBRA1-207ENST00000529553 FAM74A7A6NL05 159 aa6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 ZNF726P1Q15940 193 aa6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 RASL11AQ6T310 242 aa6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
AMBRA1-207ENST00000529553 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 KANTRA0A1W2PQU2 76 aa6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 H7C423 109 aa6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 PHF5AQ7RTV0 110 aaKnown RBP6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
AMBRA1-207ENST00000529553 CAMPP49913 170 aa6.92□□□□□ -1.3
AMBRA1-207ENST00000529553 UBE2G2P60604 165 aa6.92□□□□□ -1.3
AMBRA1-207ENST00000529553 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
AMBRA1-207ENST00000529553 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 A0A087WZ39 114 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 PFDN1O60925 122 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 MGPP08493 103 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 XCL1P47992 114 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 FHITP49789 147 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 SSTP61278 116 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 OR5A1Q8NGJ0 315 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 MLST8Q9BVC4 326 aa6.91□□□□□ -1.3
AMBRA1-207ENST00000529553 APOMO95445 188 aa6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 TSPAN13O95857 204 aa6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 NCR2O95944 276 aa6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 S100A9P06702 114 aaKnown RBP6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 SLC51BQ86UW2 128 aa6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 NUP35Q8NFH5 326 aa6.9□□□□□ -1.3
AMBRA1-207ENST00000529553 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 CCL25O15444 150 aa6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
AMBRA1-207ENST00000529553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 BCL2P10415 239 aa6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 MEF2BQ02080 365 aaPredicted RBP6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 AKR1C8PQ5T2L2 129 aa6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
AMBRA1-207ENST00000529553 UMAD1C9J7I0 102 aa6.87□□□□□ -1.31
AMBRA1-207ENST00000529553 NTF3P20783 257 aa6.87□□□□□ -1.31
AMBRA1-207ENST00000529553 SS18Q15532 418 aa6.87□□□□□ -1.31
AMBRA1-207ENST00000529553 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
AMBRA1-207ENST00000529553 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
AMBRA1-207ENST00000529553 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 AKR1C3P42330 323 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 EIF5AL1Q6IS14 154 aaKnown RBP6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 FAM213BQ8TBF2 198 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms