RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 IGHV3-38A0A0C4DH36 116 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 S100A6P06703 90 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 NPSP0C0P6 89 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 AMMECR1LQ6DCA0 310 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 DGAT2L7PQ6IED9 249 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 FA2HQ7L5A8 372 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 RMI2Q96E14 147 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 RPL39LQ96EH5 51 aaKnown RBP5.49□□□□□ -1.53
SSBP3-211ENST00000528787 YPEL4Q96NS1 127 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 CHCHD5Q9BSY4 110 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 ALKBH7Q9BT30 221 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-211ENST00000528787 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
SSBP3-211ENST00000528787 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
SSBP3-211ENST00000528787 LOC100131303A0A0U1RQF7 123 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 COLCA2A8K830 154 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 TMEM262E9PQX1 116 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 LY6G6CO95867 125 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 NPYP01303 97 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 LAGE3Q14657 143 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 ESRGQ1W209 222 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 LINC01556Q5JQF7 62 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 NFE4Q86UQ8 179 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 LINC00476Q8WZB0 136 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
SSBP3-211ENST00000528787 Q9H8V8 135 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
SSBP3-211ENST00000528787 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
SSBP3-211ENST00000528787 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 SMKR1H3BMG3 65 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 CCL25O15444 150 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 DNAH10OSP0CZ25 163 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 Q0VG73 95 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 BAGE3Q86Y29 109 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 CYSLTR1Q9Y271 337 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
SSBP3-211ENST00000528787 CSDC2Q9Y534 153 aaKnown RBP5.47□□□□□ -1.53
SSBP3-211ENST00000528787 DNAH7Q8WXX0 4024 aa5.46□□□□□ -1.53
SSBP3-211ENST00000528787 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 LOC389332A0A1B0GUA5 103 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 CRPP02741 224 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 TRGC2P03986 189 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 LINC00614P0C842 121 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
SSBP3-211ENST00000528787 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 Q6ZN92 141 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 MRPL52Q86TS9 123 aaKnown RBP5.46□□□□□ -1.54
SSBP3-211ENST00000528787 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
SSBP3-211ENST00000528787 LCE6AA0A183 80 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 A6NJY4 79 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 NIT1Q86X76 327 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 C20orf203Q8NBC4 194 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 OR5A1Q8NGJ0 315 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 C18orf32Q8TCD1 76 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 TM2D2Q9BX73 214 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 PYGO1Q9Y3Y4 419 aa5.45□□□□□ -1.54
SSBP3-211ENST00000528787 TRAV8-4A0A0B4J246 113 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 HSBP1O75506 76 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 TSHBP01222 138 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 ESDP10768 282 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 MIAQ16674 131 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 RNASEKQ6P5S7 137 aaKnown RBP5.44□□□□□ -1.54
SSBP3-211ENST00000528787 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 C2orf88Q9BSF0 95 aa5.44□□□□□ -1.54
SSBP3-211ENST00000528787 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 SCO1O75880 301 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 ATP5LO75964 103 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 HBDP02042 147 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
SSBP3-211ENST00000528787 FGF6P10767 208 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 AKR1D1P51857 326 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 SEC11AP67812 179 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 NTM-AS1Q6ZSK4 140 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 TIMM17AQ99595 171 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 TENM2Q9NT68 2774 aa5.43□□□□□ -1.54
SSBP3-211ENST00000528787 IGLV2-18A0A075B6J9 118 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 IBA57-AS1B1ANH7 110 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-211ENST00000528787 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 MRPS36P82909 103 aaKnown RBP5.42□□□□□ -1.54
SSBP3-211ENST00000528787 GAGE6Q13070 117 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 C2orf66Q6UXQ4 117 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 ERASQ7Z444 233 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 WFDC10BQ8IUB3 73 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 PACRGQ96M98 296 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-211ENST00000528787 Q9UF83 564 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 HSPB8Q9UJY1 196 aa5.42□□□□□ -1.54
SSBP3-211ENST00000528787 CSMD3Q7Z407 3707 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 EREGO14944 169 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 RBX1P62877 108 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 SS18Q15532 418 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 C1orf134Q5TEV5 83 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 TEX43Q6ZNM6 134 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 ZNF664Q8N3J9 261 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms