RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 LINC01587Q99440 93 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 FN1P02751 2386 aaKnown RBP5.45□□□□□ -1.54
C11orf54-207ENST00000528288 PRSS2P07478 247 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 Q6YL49 198 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 Q6ZSV7 163 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 TRBV6-5A0A0K0K1A5 114 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 A6NJY4 79 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 IGHV3-53P01767 116 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 NFE4Q86UQ8 179 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 H3BMM0 161 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 RHODO00212 210 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 GATA3P23771 443 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 SLC25A29Q8N8R3 303 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 Q96MF0 132 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 TNFRSF18Q9Y5U5 241 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 CR1P17927 2039 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 A0A0U1RRA0 63 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 SPINK8P0C7L1 97 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 Q5PR19 223 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 C10orf126Q8N4M7 172 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 DAND5Q8N907 189 aa5.44□□□□□ -1.54
C11orf54-207ENST00000528288 TRGV11A0A075B6L2 103 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 DYNLRB2Q8TF09 96 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 FAM104AQ969W3 186 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 SETXQ7Z333 2677 aaKnown RBP5.43□□□□□ -1.54
C11orf54-207ENST00000528288 ELANEP08246 267 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 RPL32P62910 135 aaKnown RBP5.43□□□□□ -1.54
C11orf54-207ENST00000528288 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 Q1RN00 199 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 NSUN5P1Q3KNT7 163 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 LINC01619G3V211 115 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 DSCR9P59020 149 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 CFAP126Q5VTH2 177 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 SIGMAR1Q99720 223 aa5.43□□□□□ -1.54
C11orf54-207ENST00000528288 NDUFA7O95182 113 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 RHOHQ15669 191 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 ODF3Q96PU9 254 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 LINC00467Q9BRT7 94 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 MAP6D1Q9H9H5 199 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 LEPROTO15243 131 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 ADAMTSL4-AS1Q5T5F5 129 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 Q6ZUT4 128 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
C11orf54-207ENST00000528288 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
C11orf54-207ENST00000528288 UBR5O95071 2799 aaPredicted RBP5.42□□□□□ -1.54
C11orf54-207ENST00000528288 FHL3Q13643 280 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 A0A0J9YXY3 114 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 UBE2D3P61077 147 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 UBE2D2P62837 147 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 FOXI1Q12951 378 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 NBEAL2Q6ZNJ1 2754 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 NOTCH2Q04721 2471 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 M0R2P5 195 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 PLA2G2AP14555 144 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 CARD19Q96LW7 228 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 WFDC10AQ9H1F0 79 aa5.41□□□□□ -1.54
C11orf54-207ENST00000528288 TMEM89A2RUT3 159 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 C9JAW5 83 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 J3QR89 54 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 CHCHD7Q9BUK0 85 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 TRGV1A0A0A0MS02 117 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 J3QLI3 93 aa5.4□□□□□ -1.54
C11orf54-207ENST00000528288 C1QTNF4Q9BXJ3 329 aa5.4□□□□□ -1.55
C11orf54-207ENST00000528288 DEFB114Q30KQ6 69 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-207ENST00000528288 WFDC11Q8NEX6 87 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 ERG28Q9UKR5 140 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 ITPR2Q14571 2701 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 FSHBP01225 129 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 IGHV3-33P01772 117 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 COX6A2Q02221 97 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 ANKRD29Q8N6D5 301 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 TMEM263Q8WUH6 116 aaKnown RBP5.39□□□□□ -1.55
C11orf54-207ENST00000528288 DEFB113Q30KQ7 82 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 C11orf72Q8NBR9 251 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 UBE2D4Q9Y2X8 147 aa5.39□□□□□ -1.55
C11orf54-207ENST00000528288 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 LINC00694P0DN24 101 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 DGAT2L7PQ6IED9 249 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
C11orf54-207ENST00000528288 PEMTQ9UBM1 199 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 A8MWV9 139 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 Q6ZTI0 123 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 IGKV3OR2-268A0A0C4DH90 116 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 ZNF843Q8N446 348 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 TENM4Q6N022 2769 aa5.38□□□□□ -1.55
C11orf54-207ENST00000528288 RPL35AP18077 110 aaKnown RBP5.38□□□□□ -1.55
C11orf54-207ENST00000528288 STHQ8IWL8 128 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms