RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 IGKV1-16P04430 117 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 FGF6P10767 208 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 GATA2P23769 480 aaPredicted RBP3.93□□□□□ -1.78
CHKA-204ENST00000528235 CMC4P56277 68 aaPredicted RBP3.93□□□□□ -1.78
CHKA-204ENST00000528235 RPL23P62829 140 aaKnown RBP3.93□□□□□ -1.78
CHKA-204ENST00000528235 HBG1P69891 147 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 HBG2P69892 147 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 QRFPP83859 136 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 CFAP126Q5VTH2 177 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 CLEC19AQ6UXS0 136 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 C2orf91Q6ZV80 131 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 SH2D6Q7Z4S9 175 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 LRTM2Q8N967 370 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 FAM213BQ8TBF2 198 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 SRSF12Q8WXF0 261 aaKnown RBP3.93□□□□□ -1.78
CHKA-204ENST00000528235 C18orf15Q96N68 181 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 SMIM7Q9BQ49 75 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
CHKA-204ENST00000528235 TRAV4A0A0B4J268 109 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 IGHV1-24A0A0C4DH33 117 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 A8MWL6 223 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 ATOX1O00244 68 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 MRPS12O15235 138 aaKnown RBP3.92□□□□□ -1.78
CHKA-204ENST00000528235 CST7O76096 145 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 HLA-DQA1P01909 254 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 CD3DP04234 171 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 ACYP1P07311 99 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 HLA-DRB4P13762 266 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 CXCL5P42830 114 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 LINC00205P59089 165 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 RTL8BQ17RB0 113 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 PHLDA2Q53GA4 152 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 PQLC2Q6ZP29 291 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 Q6ZR54 194 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 EEF1AKMT3Q96AZ1 226 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 MGST2Q99735 147 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 SHANK2-AS3Q9BTD1 123 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 TAS2R4Q9NYW5 299 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 HLA-DRB4X5D2U9 266 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
CHKA-204ENST00000528235 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 TRGV11A0A075B6L2 103 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 KNCNA6PVL3 124 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 PDCD6O75340 191 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 IGLV2-23P01705 113 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 RBMY1CP0DJD4 496 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 SCGB1C2P0DMR2 95 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 MIFP14174 115 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
CHKA-204ENST00000528235 ANXA2RQ3ZCQ2 193 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 RNASE12Q5GAN4 147 aaKnown RBP3.91□□□□□ -1.78
CHKA-204ENST00000528235 AMN1Q8IY45 258 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 CEND1Q8N111 149 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 TSKUQ8WUA8 353 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
CHKA-204ENST00000528235 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 ZNF331Q9NQX6 463 aaPredicted RBP3.91□□□□□ -1.78
CHKA-204ENST00000528235 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 S4R3C0 116 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 V9GY05 133 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
CHKA-204ENST00000528235 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.78
CHKA-204ENST00000528235 PIGBOS1A0A0B4J2F0 54 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 IGHV4-28A0A0C4DH34 117 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 IGHV3-35A0A0C4DH35 117 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 hDV102S1A0JD36 115 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 ZFP92A6NM28 416 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 A8MWV9 139 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 J3QRE1 110 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 Q8NAQ8 132 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 DAZ1Q9NQZ3 744 aaKnown RBP3.9□□□□□ -1.79
CHKA-204ENST00000528235 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.79
CHKA-204ENST00000528235 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 TRBV7-1A0A0A6YYK4 115 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 GRIFINA4D1Z8 144 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 RBAKDNA6NC62 111 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 H3BT86 120 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 IGKCP01834 107 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 DEFA4P12838 97 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 NPC2P61916 151 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 SERF2P84101 59 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 ARL16Q0P5N6 197 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 MMD2Q8IY49 270 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 C6orf223Q8N319 242 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 HDHD3Q9BSH5 251 aaPredicted RBP3.89□□□□□ -1.79
CHKA-204ENST00000528235 IL36BQ9NZH7 164 aa3.89□□□□□ -1.79
CHKA-204ENST00000528235 TRAV2A0A0B4J234 112 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 SRRM4A7MD48 611 aaKnown RBP3.88□□□□□ -1.79
CHKA-204ENST00000528235 CSN1S1P47710 185 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
CHKA-204ENST00000528235 HERV-K104P61576 105 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 CCL20P78556 96 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 DAZ2Q13117 558 aaKnown RBP3.88□□□□□ -1.79
CHKA-204ENST00000528235 Q5VSD8 79 aa3.88□□□□□ -1.79
CHKA-204ENST00000528235 SCGB1D4Q6XE38 83 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms