RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FAM30AQ9NZY2 134 aa21.65■■□□□ 1.06
SSSCA1-205ENST00000527920 HIGD1CA8MV81 97 aa21.64■■□□□ 1.05
SSSCA1-205ENST00000527920 A0A1B0GUT8 65 aa21.63■■□□□ 1.05
SSSCA1-205ENST00000527920 AMTP48728 403 aa21.63■■□□□ 1.05
SSSCA1-205ENST00000527920 C20orf203Q8NBC4 194 aa21.63■■□□□ 1.05
SSSCA1-205ENST00000527920 TMEM241Q24JQ0 296 aa21.62■■□□□ 1.05
SSSCA1-205ENST00000527920 Q5VSD8 79 aa21.62■■□□□ 1.05
SSSCA1-205ENST00000527920 SMDT1Q9H4I9 107 aa21.62■■□□□ 1.05
SSSCA1-205ENST00000527920 NCR2O95944 276 aa21.61■■□□□ 1.05
SSSCA1-205ENST00000527920 REG3AQ06141 175 aa21.61■■□□□ 1.05
SSSCA1-205ENST00000527920 KRTAP26-1Q6PEX3 210 aa21.61■■□□□ 1.05
SSSCA1-205ENST00000527920 CLPSL2Q6UWE3 100 aa21.61■■□□□ 1.05
SSSCA1-205ENST00000527920 RPL39LQ96EH5 51 aaKnown RBP21.61■■□□□ 1.05
SSSCA1-205ENST00000527920 UBE2L6O14933 153 aa21.6■■□□□ 1.05
SSSCA1-205ENST00000527920 ISOC2Q96AB3 205 aa21.6■■□□□ 1.05
SSSCA1-205ENST00000527920 V9GYV3 84 aa21.6■■□□□ 1.05
SSSCA1-205ENST00000527920 HLA-DQA1P01909 254 aa21.59■■□□□ 1.05
SSSCA1-205ENST00000527920 TMEM191AQ9H0A3 160 aa21.59■■□□□ 1.05
SSSCA1-205ENST00000527920 DNAH8Q96JB1 4490 aa21.59■■□□□ 1.05
SSSCA1-205ENST00000527920 IGLV4-60A0A075B6I1 120 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 TRAV8-4A0A0B4J246 113 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 TRBV6-5A0A0K0K1A5 114 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 USP17L23D6RBM5 183 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 HAMPP81172 84 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 PEA15Q15121 130 aa21.58■■□□□ 1.05
SSSCA1-205ENST00000527920 C9JQL5 133 aa21.57■■□□□ 1.04
SSSCA1-205ENST00000527920 SDHAF1A6NFY7 115 aa21.56■■□□□ 1.04
SSSCA1-205ENST00000527920 SMR3BP02814 79 aaPredicted RBP21.56■■□□□ 1.04
SSSCA1-205ENST00000527920 RPL23P62829 140 aaKnown RBP21.56■■□□□ 1.04
SSSCA1-205ENST00000527920 DEFB104AQ8WTQ1 72 aa21.55■■□□□ 1.04
SSSCA1-205ENST00000527920 NAT8Q9UHE5 227 aa21.55■■□□□ 1.04
SSSCA1-205ENST00000527920 FAM229AH3BQW9 127 aa21.54■■□□□ 1.04
SSSCA1-205ENST00000527920 H7C423 109 aa21.53■■□□□ 1.04
SSSCA1-205ENST00000527920 SRSF3P84103 164 aaKnown RBP21.52■■□□□ 1.04
SSSCA1-205ENST00000527920 LINC01620Q4KN68 170 aa21.52■■□□□ 1.04
SSSCA1-205ENST00000527920 APCSP02743 223 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 RIGQ13278 110 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 ADIRFQ15847 76 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 NUP35Q8NFH5 326 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 MRAP2Q96G30 205 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 RNF185Q96GF1 192 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 NAT8BQ9UHF3 227 aa21.51■■□□□ 1.03
SSSCA1-205ENST00000527920 I3L3M4 83 aa21.5■■□□□ 1.03
SSSCA1-205ENST00000527920 IGLV10-54A0A075B6I4 117 aa21.49■■□□□ 1.03
SSSCA1-205ENST00000527920 RAB4AP20338 218 aa21.49■■□□□ 1.03
SSSCA1-205ENST00000527920 DGAT2L7PQ6IED9 249 aa21.49■■□□□ 1.03
SSSCA1-205ENST00000527920 PRSS1P07477 247 aa21.48■■□□□ 1.03
SSSCA1-205ENST00000527920 CLRN3Q8NCR9 226 aa21.48■■□□□ 1.03
SSSCA1-205ENST00000527920 ST20Q9HBF5 79 aa21.48■■□□□ 1.03
SSSCA1-205ENST00000527920 INAFM2P0DMQ5 153 aa21.47■■□□□ 1.03
SSSCA1-205ENST00000527920 PMCHP20382 165 aa21.47■■□□□ 1.03
SSSCA1-205ENST00000527920 GAS8-AS1O95177 125 aa21.46■■□□□ 1.03
SSSCA1-205ENST00000527920 AMMECR1LQ6DCA0 310 aa21.46■■□□□ 1.03
SSSCA1-205ENST00000527920 AMN1Q8IY45 258 aa21.46■■□□□ 1.03
SSSCA1-205ENST00000527920 SMIM27A0A1W2PRY6 76 aa21.45■■□□□ 1.02
SSSCA1-205ENST00000527920 POLR2KP53803 58 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-205ENST00000527920 CHAC1Q9BUX1 264 aa21.44■■□□□ 1.02
SSSCA1-205ENST00000527920 ZNF25P17030 456 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-205ENST00000527920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 TRBV27A0A0K0K1C4 114 aa21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 IGKV2-29A2NJV5 120 aaPredicted RBP21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 PPP1R17O96001 155 aa21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 FGF6P10767 208 aa21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 RPS10P46783 165 aaKnown RBP21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 SCXQ7RTU7 201 aa21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 VPS13BQ7Z7G8 4022 aa21.42■■□□□ 1.02
SSSCA1-205ENST00000527920 SRRM2Q9UQ35 2752 aaKnown RBP21.41■■□□□ 1.02
SSSCA1-205ENST00000527920 TSHBP01222 138 aa21.41■■□□□ 1.02
SSSCA1-205ENST00000527920 ESDP10768 282 aa21.41■■□□□ 1.02
SSSCA1-205ENST00000527920 C9orf163Q8N9P6 203 aa21.41■■□□□ 1.02
SSSCA1-205ENST00000527920 A0A1B0GW15 77 aa21.4■■□□□ 1.02
SSSCA1-205ENST00000527920 RNASEKQ6P5S7 137 aaKnown RBP21.4■■□□□ 1.02
SSSCA1-205ENST00000527920 CNBPP62633 177 aaKnown RBP21.38■■□□□ 1.01
SSSCA1-205ENST00000527920 TMEM242Q9NWH2 141 aa21.38■■□□□ 1.01
SSSCA1-205ENST00000527920 FAM104BQ5XKR9 115 aa21.36■■□□□ 1.01
SSSCA1-205ENST00000527920 LINC00528Q8N1L1 170 aa21.36■■□□□ 1.01
SSSCA1-205ENST00000527920 PLA2G1BP04054 148 aaKnown RBP21.35■■□□□ 1.01
SSSCA1-205ENST00000527920 NRACQ8N912 160 aa21.35■■□□□ 1.01
SSSCA1-205ENST00000527920 BTF3L4Q96K17 158 aa21.35■■□□□ 1.01
SSSCA1-205ENST00000527920 hDV102S1A0JD36 115 aa21.34■■□□□ 1.01
SSSCA1-205ENST00000527920 VCYO14598 125 aa21.34■■□□□ 1.01
SSSCA1-205ENST00000527920 MRPL52Q86TS9 123 aaKnown RBP21.34■■□□□ 1.01
SSSCA1-205ENST00000527920 CIRBP-AS1Q8TBR5 109 aa21.34■■□□□ 1.01
SSSCA1-205ENST00000527920 TMEM101Q96IK0 257 aa21.34■■□□□ 1.01
SSSCA1-205ENST00000527920 SMKR1H3BMG3 65 aa21.33■■□□□ 1.01
SSSCA1-205ENST00000527920 SUMO2P61956 95 aaKnown RBP21.33■■□□□ 1.01
SSSCA1-205ENST00000527920 OR5A1Q8NGJ0 315 aa21.33■■□□□ 1.01
SSSCA1-205ENST00000527920 IGKV3OR2-268A0A0C4DH90 116 aa21.32■■□□□ 1
SSSCA1-205ENST00000527920 LINC00862A6NCI5 91 aa21.32■■□□□ 1
SSSCA1-205ENST00000527920 GAGE12HA6NDE8 117 aa21.32■■□□□ 1
SSSCA1-205ENST00000527920 CFAP161Q6P656 301 aa21.32■■□□□ 1
SSSCA1-205ENST00000527920 CHCHD10Q8WYQ3 142 aaPredicted RBP21.32■■□□□ 1
SSSCA1-205ENST00000527920 C7orf77A4D0Y5 90 aa21.31■■□□□ 1
SSSCA1-205ENST00000527920 PPP1R2P9O14990 202 aa21.31■■□□□ 1
SSSCA1-205ENST00000527920 S100A8P05109 93 aa21.31■■□□□ 1
SSSCA1-205ENST00000527920 MRPL51Q4U2R6 128 aaKnown RBP21.31■■□□□ 1
SSSCA1-205ENST00000527920 AP5S1Q9NUS5 200 aa21.31■■□□□ 1
SSSCA1-205ENST00000527920 CAMPP49913 170 aa21.3■■□□□ 1
SSSCA1-205ENST00000527920 RAB14P61106 215 aa21.29■■□□□ 1
SSSCA1-205ENST00000527920 FLG2Q5D862 2391 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms