RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 LOC100131303A0A0U1RQF7 123 aa14.43□□□□□ -0.1
PKP3-205ENST00000527442 GYPEP15421 78 aa14.43□□□□□ -0.1
PKP3-205ENST00000527442 TMEM70Q9BUB7 260 aa14.43□□□□□ -0.1
PKP3-205ENST00000527442 TNFRSF18Q9Y5U5 241 aa14.43□□□□□ -0.1
PKP3-205ENST00000527442 A0A0J9YY99 117 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 SDHAF1A6NFY7 115 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BKO60814 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BJP06899 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BOP23527 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BBP33778 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 POLR2KP53803 58 aaKnown RBP14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BDP58876 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 UBE2D3P61077 147 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BCP62807 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 UBE2D2P62837 147 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST2H2BEQ16778 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BHQ93079 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BNQ99877 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 HIST1H2BMQ99879 126 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
PKP3-205ENST00000527442 GAGE12JA6NER3 117 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 RAB5BP61020 215 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 Q0VG73 95 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 GAGE1Q13065 139 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 GAGE4Q13068 117 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 GAGE5Q13069 117 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 GAGE13Q4V321 117 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 SPATA12Q7Z6I5 190 aa14.41□□□□□ -0.1
PKP3-205ENST00000527442 TRBV27A0A0K0K1C4 114 aa14.4□□□□□ -0.1
PKP3-205ENST00000527442 ICOSQ9Y6W8 199 aa14.4□□□□□ -0.1
PKP3-205ENST00000527442 NUDT3O95989 172 aa14.39□□□□□ -0.11
PKP3-205ENST00000527442 PMCHP20382 165 aa14.39□□□□□ -0.11
PKP3-205ENST00000527442 IQCJQ1A5X6 159 aa14.39□□□□□ -0.11
PKP3-205ENST00000527442 LINC00588Q9Y4M8 146 aa14.39□□□□□ -0.11
PKP3-205ENST00000527442 MRPL23Q16540 153 aaKnown RBP14.38□□□□□ -0.11
PKP3-205ENST00000527442 DAZ4Q86SG3 579 aaKnown RBP14.38□□□□□ -0.11
PKP3-205ENST00000527442 Q8N8P6 123 aa14.38□□□□□ -0.11
PKP3-205ENST00000527442 NXT2Q9NPJ8 142 aaKnown RBP14.38□□□□□ -0.11
PKP3-205ENST00000527442 DAZ3Q9NR90 486 aaKnown RBP14.38□□□□□ -0.11
PKP3-205ENST00000527442 A0A096LPF7 62 aa14.37□□□□□ -0.11
PKP3-205ENST00000527442 VCYO14598 125 aa14.37□□□□□ -0.11
PKP3-205ENST00000527442 SH2D6Q7Z4S9 175 aa14.37□□□□□ -0.11
PKP3-205ENST00000527442 LOC389332A0A1B0GUA5 103 aa14.36□□□□□ -0.11
PKP3-205ENST00000527442 I3L3M4 83 aa14.36□□□□□ -0.11
PKP3-205ENST00000527442 LINC01546A6NGU7 62 aa14.35□□□□□ -0.11
PKP3-205ENST00000527442 IFI27P40305 119 aaPredicted RBP14.35□□□□□ -0.11
PKP3-205ENST00000527442 CCL18P55774 89 aa14.35□□□□□ -0.11
PKP3-205ENST00000527442 KRTAP10-2P60368 255 aa14.35□□□□□ -0.11
PKP3-205ENST00000527442 KRTAP1-5Q9BYS1 174 aa14.35□□□□□ -0.11
PKP3-205ENST00000527442 K7EMI3 77 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 TCAPO15273 167 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 COA6Q5JTJ3 125 aaKnown RBP14.34□□□□□ -0.11
PKP3-205ENST00000527442 NEGR1Q7Z3B1 354 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 ATP6V0E2Q8NHE4 81 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 URB1-AS1Q96HZ7 61 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 KIR2DL4Q99706 377 aa14.34□□□□□ -0.11
PKP3-205ENST00000527442 BAGE3Q86Y29 109 aa14.33□□□□□ -0.12
PKP3-205ENST00000527442 DMBT1Q9UGM3 2413 aaPredicted RBP14.32□□□□□ -0.12
PKP3-205ENST00000527442 IGHV3-38A0A0C4DH36 116 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 TSHBP01222 138 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 LINC00310P59036 64 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 TMEM97Q5BJF2 176 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 FA2HQ7L5A8 372 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 CHCHD1Q96BP2 118 aaKnown RBP14.32□□□□□ -0.12
PKP3-205ENST00000527442 GTSF1LQ9H1H1 148 aa14.32□□□□□ -0.12
PKP3-205ENST00000527442 LINC00614P0C842 121 aa14.31□□□□□ -0.12
PKP3-205ENST00000527442 TIRAPP58753 221 aa14.31□□□□□ -0.12
PKP3-205ENST00000527442 COTL1Q14019 142 aa14.31□□□□□ -0.12
PKP3-205ENST00000527442 NIT1Q86X76 327 aa14.31□□□□□ -0.12
PKP3-205ENST00000527442 AP5S1Q9NUS5 200 aa14.31□□□□□ -0.12
PKP3-205ENST00000527442 SERF1AO75920 110 aa14.29□□□□□ -0.12
PKP3-205ENST00000527442 RNASEKQ6P5S7 137 aaKnown RBP14.29□□□□□ -0.12
PKP3-205ENST00000527442 Q9H8V8 135 aa14.29□□□□□ -0.12
PKP3-205ENST00000527442 FCER1GP30273 86 aa14.28□□□□□ -0.12
PKP3-205ENST00000527442 LAGE3Q14657 143 aa14.28□□□□□ -0.12
PKP3-205ENST00000527442 ORMDL2Q53FV1 153 aa14.28□□□□□ -0.12
PKP3-205ENST00000527442 NTM-AS1Q6ZSK4 140 aa14.28□□□□□ -0.12
PKP3-205ENST00000527442 EPM2AB3EWF7 344 aa14.27□□□□□ -0.13
PKP3-205ENST00000527442 ESDP10768 282 aa14.27□□□□□ -0.13
PKP3-205ENST00000527442 NDUFA6P56556 154 aa14.27□□□□□ -0.13
PKP3-205ENST00000527442 TTC32Q5I0X7 151 aa14.27□□□□□ -0.13
PKP3-205ENST00000527442 TRBV6-8A0A0A6YYG3 113 aa14.26□□□□□ -0.13
PKP3-205ENST00000527442 BTF3P20290 206 aaKnown RBP14.26□□□□□ -0.13
PKP3-205ENST00000527442 IGHV1-24A0A0C4DH33 117 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 HSBP1O75506 76 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 AMTP48728 403 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 LYPD5Q6UWN5 251 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 DEFB104AQ8WTQ1 72 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 CHCHD7Q9BUK0 85 aa14.25□□□□□ -0.13
PKP3-205ENST00000527442 TRBV25-1A0A075B6N4 114 aa14.24□□□□□ -0.13
PKP3-205ENST00000527442 S100A6P06703 90 aa14.24□□□□□ -0.13
PKP3-205ENST00000527442 LELP1Q5T871 98 aa14.24□□□□□ -0.13
PKP3-205ENST00000527442 NUPR1O60356 82 aa14.23□□□□□ -0.13
PKP3-205ENST00000527442 TMA7Q9Y2S6 64 aaKnown RBP14.23□□□□□ -0.13
PKP3-205ENST00000527442 A0A096LNJ9 63 aa14.22□□□□□ -0.13
PKP3-205ENST00000527442 INAFM2P0DMQ5 153 aa14.22□□□□□ -0.13
PKP3-205ENST00000527442 G0S2P27469 103 aa14.22□□□□□ -0.13
PKP3-205ENST00000527442 C20orf203Q8NBC4 194 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms