RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CRIP2P52943 208 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-208ENST00000527323 ERG28Q9UKR5 140 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 BEX4Q9NWD9 120 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-208ENST00000527323 C2CD3Q4AC94 2353 aa9.29□□□□□ -0.92
CAPN1-208ENST00000527323 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
CAPN1-208ENST00000527323 IGHG2P01859 326 aa9.29□□□□□ -0.92
CAPN1-208ENST00000527323 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
CAPN1-208ENST00000527323 VCX2Q9H322 139 aa9.29□□□□□ -0.92
CAPN1-208ENST00000527323 B4DSR2 109 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 SLC25A20O43772 301 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 MUSTN1Q8IVN3 82 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 LGALS9O00182 355 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 LEPROTO15243 131 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 DEFB112Q30KQ8 113 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
CAPN1-208ENST00000527323 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-208ENST00000527323 H3BUA1 57 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 PRSS2P07478 247 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 HTN1P15515 57 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 Q8N1Y9 231 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 TENM1Q9UKZ4 2725 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV3-16A0A0C4DH30 117 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 TRBV6-5A0A0K0K1A5 114 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 M0QY20 66 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 AMELXQ99217 191 aa9.27□□□□□ -0.93
CAPN1-208ENST00000527323 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV4-31P0DP07 118 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 SPINK13Q1W4C9 94 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
CAPN1-208ENST00000527323 A0A096LNT2 108 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 RHOHQ15669 191 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 RHODO00212 210 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 P0DMU3 169 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 ZNF22P17026 224 aaPredicted RBP9.25□□□□□ -0.93
CAPN1-208ENST00000527323 SNRPD3P62318 126 aaKnown RBP9.25□□□□□ -0.93
CAPN1-208ENST00000527323 SBSPONQ8IVN8 264 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 A6NDX4 124 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 I3L3M4 83 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 LINC01356Q8N9X3 169 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 C20orf203Q8NBC4 194 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 C9orf85Q96MD7 179 aa9.25□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
CAPN1-208ENST00000527323 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 VWFP04275 2813 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 NSUN5P1Q3KNT7 163 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 TEX29Q8N6K0 151 aa9.24□□□□□ -0.93
CAPN1-208ENST00000527323 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-208ENST00000527323 K7EMT4 169 aa9.23□□□□□ -0.93
CAPN1-208ENST00000527323 NTN5Q8WTR8 489 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-208ENST00000527323 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
CAPN1-208ENST00000527323 RNF183Q96D59 192 aa9.23□□□□□ -0.93
CAPN1-208ENST00000527323 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-208ENST00000527323 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
CAPN1-208ENST00000527323 CD28P10747 220 aa9.23□□□□□ -0.93
CAPN1-208ENST00000527323 IGLV4-3A0A075B6K6 122 aa9.22□□□□□ -0.93
CAPN1-208ENST00000527323 A0A0J9YX75 114 aa9.22□□□□□ -0.93
CAPN1-208ENST00000527323 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
CAPN1-208ENST00000527323 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
CAPN1-208ENST00000527323 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
CAPN1-208ENST00000527323 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
CAPN1-208ENST00000527323 A0A0J9YXY3 114 aa9.21□□□□□ -0.93
CAPN1-208ENST00000527323 BRI3O95415 125 aa9.21□□□□□ -0.93
CAPN1-208ENST00000527323 YAE1D1Q9NRH1 226 aa9.21□□□□□ -0.93
CAPN1-208ENST00000527323 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
CAPN1-208ENST00000527323 NPC2P61916 151 aa9.21□□□□□ -0.94
CAPN1-208ENST00000527323 LINC01620Q4KN68 170 aa9.21□□□□□ -0.94
CAPN1-208ENST00000527323 CEMP1Q6PRD7 247 aaPredicted RBP9.21□□□□□ -0.94
CAPN1-208ENST00000527323 TRAV8-3A0A0A6YYJ7 113 aa9.2□□□□□ -0.94
CAPN1-208ENST00000527323 ELANEP08246 267 aa9.2□□□□□ -0.94
CAPN1-208ENST00000527323 M0R2P5 195 aa9.2□□□□□ -0.94
CAPN1-208ENST00000527323 SNCGO76070 127 aa9.2□□□□□ -0.94
CAPN1-208ENST00000527323 A0A1W2PRX2 142 aa9.2□□□□□ -0.94
CAPN1-208ENST00000527323 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 ANK3Q12955 4377 aaKnown RBP9.19□□□□□ -0.94
CAPN1-208ENST00000527323 KNCNA6PVL3 124 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 PROK1P58294 105 aa9.19□□□□□ -0.94
CAPN1-208ENST00000527323 CYSRT1A8MQ03 144 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 TRIAP1O43715 76 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
CAPN1-208ENST00000527323 STAB1Q9NY15 2570 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms