RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 K7EP13 123 aa8.6□□□□□ -1.03
VEGFA-224ENST00000523873 CKS2P33552 79 aa8.6□□□□□ -1.03
VEGFA-224ENST00000523873 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
VEGFA-224ENST00000523873 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
VEGFA-224ENST00000523873 I3L3M4 83 aa8.59□□□□□ -1.03
VEGFA-224ENST00000523873 TSHBP01222 138 aa8.59□□□□□ -1.03
VEGFA-224ENST00000523873 NPYP01303 97 aa8.59□□□□□ -1.03
VEGFA-224ENST00000523873 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
VEGFA-224ENST00000523873 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
VEGFA-224ENST00000523873 RBX1P62877 108 aa8.59□□□□□ -1.03
VEGFA-224ENST00000523873 RHEBQ15382 184 aa8.59□□□□□ -1.03
VEGFA-224ENST00000523873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-224ENST00000523873 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-224ENST00000523873 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 APCSP02743 223 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
VEGFA-224ENST00000523873 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
VEGFA-224ENST00000523873 CLPSL2Q6UWE3 100 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 CHCHD7Q9BUK0 85 aa8.58□□□□□ -1.04
VEGFA-224ENST00000523873 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 UBE2L6O14933 153 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 S100PP25815 95 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 LAGE3Q14657 143 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
VEGFA-224ENST00000523873 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 SNAPINO95295 136 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 FUSP35637 526 aaKnown RBP eCLIP8.56□□□□□ -1.043e-8■□□□□ 10.5
VEGFA-224ENST00000523873 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 SVBPQ8N300 66 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 PRELID3AQ96N28 172 aa8.56□□□□□ -1.04
VEGFA-224ENST00000523873 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 VCYO14598 125 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 PSCAO43653 123 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 PPP1R17O96001 155 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 PKIAP61925 76 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 ELOBQ15370 118 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 KIAA1644Q3SXP7 199 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
VEGFA-224ENST00000523873 DNAH11Q96DT5 4516 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 TGIF2-C20orf24A0A0A6YYL0 155 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 CRPP02741 224 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 PPBPP02775 128 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 ESDP10768 282 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 FCER1GP30273 86 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
VEGFA-224ENST00000523873 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
VEGFA-224ENST00000523873 A0A087WTM6 91 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 FGF6P10767 208 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 WFDC2Q14508 124 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 PKD1P98161 4303 aa8.53□□□□□ -1.04
VEGFA-224ENST00000523873 IGKV3OR2-268A0A0C4DH90 116 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 TCAPO15273 167 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 REG3AQ06141 175 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
VEGFA-224ENST00000523873 DYNC1H1Q14204 4646 aaKnown RBP8.52□□□□□ -1.05
VEGFA-224ENST00000523873 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 PHOX2AO14813 284 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 LECT2O14960 151 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
VEGFA-224ENST00000523873 Q0VG73 95 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 TM2D2Q9BX73 214 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
VEGFA-224ENST00000523873 H7C423 109 aa8.5□□□□□ -1.05
VEGFA-224ENST00000523873 RMI2Q96E14 147 aa8.5□□□□□ -1.05
VEGFA-224ENST00000523873 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
VEGFA-224ENST00000523873 GNB1LQ9BYB4 327 aa8.5□□□□□ -1.05
VEGFA-224ENST00000523873 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
VEGFA-224ENST00000523873 MAP1LC3AQ9H492 121 aa8.5□□□□□ -1.05
VEGFA-224ENST00000523873 MIAQ16674 131 aa8.49□□□□□ -1.05
VEGFA-224ENST00000523873 CBLN2Q8IUK8 224 aa8.49□□□□□ -1.05
VEGFA-224ENST00000523873 LAMTOR2Q9Y2Q5 125 aa8.49□□□□□ -1.05
VEGFA-224ENST00000523873 EREGO14944 169 aa8.48□□□□□ -1.05
VEGFA-224ENST00000523873 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
VEGFA-224ENST00000523873 RNASE13Q5GAN3 156 aaKnown RBP8.48□□□□□ -1.05
VEGFA-224ENST00000523873 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
VEGFA-224ENST00000523873 OR5A1Q8NGJ0 315 aa8.48□□□□□ -1.05
VEGFA-224ENST00000523873 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
VEGFA-224ENST00000523873 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
VEGFA-224ENST00000523873 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
VEGFA-224ENST00000523873 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
VEGFA-224ENST00000523873 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms