RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 NUP35Q8NFH5 326 aa6.25□□□□□ -1.41
PABPC1-222ENST00000523555 NAT8Q9UHE5 227 aa6.25□□□□□ -1.41
PABPC1-222ENST00000523555 A0A1B0GUT8 65 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 CRPP02741 224 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 RPS10P46783 165 aaKnown RBP6.24□□□□□ -1.41
PABPC1-222ENST00000523555 PEA15Q15121 130 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 ELOBQ15370 118 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 AMN1Q8IY45 258 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 Q8N1X5 172 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 LINC00269Q8N2A0 174 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-222ENST00000523555 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-222ENST00000523555 PRR34Q9NV39 138 aa6.24□□□□□ -1.41
PABPC1-222ENST00000523555 SMKR1H3BMG3 65 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 NCR2O95944 276 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 RAB4AP20338 218 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 Q0VG73 95 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 RMI2Q96E14 147 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 TMEM243Q9BU79 118 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
PABPC1-222ENST00000523555 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-222ENST00000523555 IGKV2-29A2NJV5 120 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-222ENST00000523555 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 SDHAF1A6NFY7 115 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 HLA-DQA1P01909 254 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-222ENST00000523555 AMTP48728 403 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 COTL1Q14019 142 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 SMIM15Q7Z3B0 74 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 FRZBQ92765 325 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 COX11Q9Y6N1 276 aa6.22□□□□□ -1.41
PABPC1-222ENST00000523555 TRBV6-5A0A0K0K1A5 114 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 SMIM27A0A1W2PRY6 76 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 PKIAP61925 76 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 IFITM2Q01629 132 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 REG3AQ06141 175 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 MIAQ16674 131 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 BORCS7Q96B45 105 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 SMDT1Q9H4I9 107 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 NAT8BQ9UHF3 227 aa6.21□□□□□ -1.42
PABPC1-222ENST00000523555 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 UBE2L6O14933 153 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 TSHBP01222 138 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
PABPC1-222ENST00000523555 NRACQ8N912 160 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 TMEM70Q9BUB7 260 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
PABPC1-222ENST00000523555 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 I3L3M4 83 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 APCSP02743 223 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 PRSS1P07477 247 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 PMCHP20382 165 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 CAMPP49913 170 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 RIGQ13278 110 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
PABPC1-222ENST00000523555 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
PABPC1-222ENST00000523555 Q6ZSA8 131 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 ST20Q9HBF5 79 aa6.19□□□□□ -1.42
PABPC1-222ENST00000523555 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 A0A1B0GXF2 115 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 FGF6P10767 208 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 ESDP10768 282 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 Q5VSD8 79 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 FAM104BQ5XKR9 115 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
PABPC1-222ENST00000523555 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
PABPC1-222ENST00000523555 EPM2AB3EWF7 344 aa6.17□□□□□ -1.42
PABPC1-222ENST00000523555 ADCYAP1P18509 176 aa6.17□□□□□ -1.42
PABPC1-222ENST00000523555 CLLU1Q5K131 121 aa6.17□□□□□ -1.42
PABPC1-222ENST00000523555 RNASEKQ6P5S7 137 aaKnown RBP6.17□□□□□ -1.42
PABPC1-222ENST00000523555 SLPIP03973 132 aa6.16□□□□□ -1.42
PABPC1-222ENST00000523555 RAB14P61106 215 aa6.16□□□□□ -1.42
PABPC1-222ENST00000523555 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
PABPC1-222ENST00000523555 TRAV8-4A0A0B4J246 113 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 PANO1I0J062 215 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.42
PABPC1-222ENST00000523555 HBBP68871 147 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
PABPC1-222ENST00000523555 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.43
PABPC1-222ENST00000523555 D6R8Y8 96 aa6.14□□□□□ -1.43
PABPC1-222ENST00000523555 H7C423 109 aa6.14□□□□□ -1.43
PABPC1-222ENST00000523555 NPYP01303 97 aa6.14□□□□□ -1.43
PABPC1-222ENST00000523555 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
PABPC1-222ENST00000523555 CHCHD10Q8WYQ3 142 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-222ENST00000523555 TRBV24-1A0A075B6N3 115 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 A0A1B0GW15 77 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 C7orf77A4D0Y5 90 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 VCYO14598 125 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 TNFRSF6BO95407 300 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 CKS2P33552 79 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 FOXI1Q12951 378 aa6.13□□□□□ -1.43
PABPC1-222ENST00000523555 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
PABPC1-222ENST00000523555 C9orf163Q8N9P6 203 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms