RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TRBV6-5A0A0K0K1A5 114 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 KRTDAPP60985 99 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 UBE2D3P61077 147 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 UBE2D2P62837 147 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 UBE2L6O14933 153 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 LEPROTL1O95214 131 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
SDCBP-212ENST00000523483 CEMP1Q6PRD7 247 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-212ENST00000523483 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 CHCHD1Q96BP2 118 aaKnown RBP6.52□□□□□ -1.37
SDCBP-212ENST00000523483 EDA2RQ9HAV5 297 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 TSHBP01222 138 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 HBDP02042 147 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 LINC00173Q6ZV60 143 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 GAGE6Q13070 117 aa6.52□□□□□ -1.37
SDCBP-212ENST00000523483 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.37
SDCBP-212ENST00000523483 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.37
SDCBP-212ENST00000523483 AMMECR1LQ6DCA0 310 aa6.51□□□□□ -1.37
SDCBP-212ENST00000523483 HIST1H2BLQ99880 126 aa6.51□□□□□ -1.37
SDCBP-212ENST00000523483 PACRGQ96M98 296 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-212ENST00000523483 CYSLTR1Q9Y271 337 aa6.51□□□□□ -1.37
SDCBP-212ENST00000523483 TRBV25-1A0A075B6N4 114 aa6.51□□□□□ -1.37
SDCBP-212ENST00000523483 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
SDCBP-212ENST00000523483 NTM-AS1Q6ZSK4 140 aa6.5□□□□□ -1.37
SDCBP-212ENST00000523483 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-212ENST00000523483 PMCHL2Q9BQD1 86 aa6.5□□□□□ -1.37
SDCBP-212ENST00000523483 PRSS1P07477 247 aa6.5□□□□□ -1.37
SDCBP-212ENST00000523483 COA6Q5JTJ3 125 aaKnown RBP6.5□□□□□ -1.37
SDCBP-212ENST00000523483 IFITM10A6NMD0 228 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 ZC2HC1BQ5TFG8 222 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 Q8N976 141 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 TMEM243Q9BU79 118 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 GTSF1LQ9H1H1 148 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 A0A096LNJ9 63 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 LINC00694P0DN24 101 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 CLPSL2Q6UWE3 100 aa6.49□□□□□ -1.37
SDCBP-212ENST00000523483 Q6ZN92 141 aa6.48□□□□□ -1.37
SDCBP-212ENST00000523483 A0A087WX48 190 aa6.48□□□□□ -1.37
SDCBP-212ENST00000523483 Q8N3U1 123 aa6.48□□□□□ -1.37
SDCBP-212ENST00000523483 C20orf203Q8NBC4 194 aa6.48□□□□□ -1.37
SDCBP-212ENST00000523483 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
SDCBP-212ENST00000523483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-212ENST00000523483 SCGB1D1O95968 90 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 FGF6P10767 208 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 TCTAP57738 103 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 IFI27L1Q96BM0 104 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 CHCHD7Q9BUK0 85 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 MAP1LC3CQ9BXW4 147 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 PRSS47A8MTI9 375 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 ESRGQ1W209 222 aa6.47□□□□□ -1.37
SDCBP-212ENST00000523483 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.37
SDCBP-212ENST00000523483 LYPD5Q6UWN5 251 aa6.46□□□□□ -1.37
SDCBP-212ENST00000523483 ATOH7Q8N100 152 aa6.46□□□□□ -1.37
SDCBP-212ENST00000523483 C3orf79P0CE67 100 aa6.46□□□□□ -1.38
SDCBP-212ENST00000523483 WFDC10BQ8IUB3 73 aa6.46□□□□□ -1.38
SDCBP-212ENST00000523483 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.38
SDCBP-212ENST00000523483 KLK5Q9Y337 293 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-212ENST00000523483 ESDP10768 282 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 G0S2P27469 103 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 CCL18P55774 89 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 MPV17L2Q567V2 206 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 TOMM6Q96B49 74 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 K7EMI3 77 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 Q6ZUT4 128 aa6.45□□□□□ -1.38
SDCBP-212ENST00000523483 ATP5LO75964 103 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
SDCBP-212ENST00000523483 ERASQ7Z444 233 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 C15orf53Q8NAA6 179 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 VCX2Q9H322 139 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 NUPR2A6NF83 97 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 CSMD3Q7Z407 3707 aa6.44□□□□□ -1.38
SDCBP-212ENST00000523483 IGLV4-60A0A075B6I1 120 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 TMEM97Q5BJF2 176 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 LELP1Q5T871 98 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 MUC7Q8TAX7 377 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 LOC105371267A0A1B0GV96 52 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 PRSS29PA6NIE9 313 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 IGLV10-54A0A075B6I4 117 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms