RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 IFI27P40305 119 aaPredicted RBP16.53■□□□□ 0.24
PVT1-212ENST00000521951 AMTP48728 403 aa16.53■□□□□ 0.24
PVT1-212ENST00000521951 C18orf32Q8TCD1 76 aa16.53■□□□□ 0.24
PVT1-212ENST00000521951 LY6G6CO95867 125 aa16.52■□□□□ 0.24
PVT1-212ENST00000521951 FCER1GP30273 86 aa16.52■□□□□ 0.24
PVT1-212ENST00000521951 WFDC10BQ8IUB3 73 aa16.52■□□□□ 0.24
PVT1-212ENST00000521951 NXT2Q9NPJ8 142 aaKnown RBP16.52■□□□□ 0.24
PVT1-212ENST00000521951 TCAPO15273 167 aa16.51■□□□□ 0.23
PVT1-212ENST00000521951 PRSS3P2Q8NHM4 247 aa16.5■□□□□ 0.23
PVT1-212ENST00000521951 TMEM243Q9BU79 118 aa16.5■□□□□ 0.23
PVT1-212ENST00000521951 CHCHD7Q9BUK0 85 aa16.5■□□□□ 0.23
PVT1-212ENST00000521951 CHCHD5Q9BSY4 110 aa16.5■□□□□ 0.23
PVT1-212ENST00000521951 DNAH1Q9P2D7 4330 aa16.49■□□□□ 0.23
PVT1-212ENST00000521951 ESDP10768 282 aa16.49■□□□□ 0.23
PVT1-212ENST00000521951 Q9H8V8 135 aa16.49■□□□□ 0.23
PVT1-212ENST00000521951 SIVA1O15304 175 aa16.48■□□□□ 0.23
PVT1-212ENST00000521951 GAGE6Q13070 117 aa16.46■□□□□ 0.23
PVT1-212ENST00000521951 NIT1Q86X76 327 aa16.46■□□□□ 0.23
PVT1-212ENST00000521951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.45■□□□□ 0.22
PVT1-212ENST00000521951 IGKV2-29A2NJV5 120 aaPredicted RBP16.45■□□□□ 0.22
PVT1-212ENST00000521951 TMEM262E9PQX1 116 aa16.45■□□□□ 0.22
PVT1-212ENST00000521951 K7EMI3 77 aa16.45■□□□□ 0.22
PVT1-212ENST00000521951 FA2HQ7L5A8 372 aa16.45■□□□□ 0.22
PVT1-212ENST00000521951 URB1-AS1Q96HZ7 61 aa16.45■□□□□ 0.22
PVT1-212ENST00000521951 LINC01546A6NGU7 62 aa16.44■□□□□ 0.22
PVT1-212ENST00000521951 UBE2L6O14933 153 aa16.44■□□□□ 0.22
PVT1-212ENST00000521951 DNAH10OSP0CZ25 163 aa16.44■□□□□ 0.22
PVT1-212ENST00000521951 LAGE3Q14657 143 aa16.44■□□□□ 0.22
PVT1-212ENST00000521951 Q8N3U1 123 aa16.44■□□□□ 0.22
PVT1-212ENST00000521951 LCE6AA0A183 80 aa16.43■□□□□ 0.22
PVT1-212ENST00000521951 Q0VG73 95 aa16.43■□□□□ 0.22
PVT1-212ENST00000521951 ORMDL2Q53FV1 153 aa16.43■□□□□ 0.22
PVT1-212ENST00000521951 C20orf203Q8NBC4 194 aa16.43■□□□□ 0.22
PVT1-212ENST00000521951 LINC00614P0C842 121 aa16.42■□□□□ 0.22
PVT1-212ENST00000521951 LINC01556Q5JQF7 62 aa16.42■□□□□ 0.22
PVT1-212ENST00000521951 H7C423 109 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BKO60814 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 IGHV3-30P01768 117 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 IGHV3-33P01772 117 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BJP06899 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 IGHV3-30-3P0DP02 117 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 IGHV3-30-5P0DP03 117 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BOP23527 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BBP33778 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BDP58876 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 PKIAP61925 76 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BCP62807 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST2H2BEQ16778 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BHQ93079 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BNQ99877 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 HIST1H2BMQ99879 126 aa16.41■□□□□ 0.22
PVT1-212ENST00000521951 A0A087WX48 190 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 RAB5BP61020 215 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 MPV17L2Q567V2 206 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 C1orf196B1AJZ1 125 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 RPL39P62891 51 aaKnown RBP16.4■□□□□ 0.22
PVT1-212ENST00000521951 BAGE3Q86Y29 109 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 AP5S1Q9NUS5 200 aa16.4■□□□□ 0.22
PVT1-212ENST00000521951 FGF6P10767 208 aa16.39■□□□□ 0.21
PVT1-212ENST00000521951 RNASEKQ6P5S7 137 aaKnown RBP16.39■□□□□ 0.21
PVT1-212ENST00000521951 TMEM18Q96B42 140 aa16.39■□□□□ 0.21
PVT1-212ENST00000521951 RBX1P62877 108 aa16.38■□□□□ 0.21
PVT1-212ENST00000521951 Q8N976 141 aa16.38■□□□□ 0.21
PVT1-212ENST00000521951 A0A1B0GUV1 79 aa16.37■□□□□ 0.21
PVT1-212ENST00000521951 AMMECR1LQ6DCA0 310 aa16.37■□□□□ 0.21
PVT1-212ENST00000521951 DNAH6Q9C0G6 4158 aa16.36■□□□□ 0.21
PVT1-212ENST00000521951 SACSQ9NZJ4 4579 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 IGLV4-60A0A075B6I1 120 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 NBDYA0A0U1RRE5 68 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 C2orf66Q6UXQ4 117 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 MRPL52Q86TS9 123 aaKnown RBP16.35■□□□□ 0.21
PVT1-212ENST00000521951 CHCHD1Q96BP2 118 aaKnown RBP16.35■□□□□ 0.21
PVT1-212ENST00000521951 TRAV9-2A0A087WT02 112 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 BTF3P20290 206 aaKnown RBP16.35■□□□□ 0.21
PVT1-212ENST00000521951 KRTAP1-5Q9BYS1 174 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 CYSLTR1Q9Y271 337 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 UBE2D4Q9Y2X8 147 aa16.35■□□□□ 0.21
PVT1-212ENST00000521951 KMT2AQ03164 3969 aa16.34■□□□□ 0.21
PVT1-212ENST00000521951 M0R2N4 97 aa16.34■□□□□ 0.21
PVT1-212ENST00000521951 G0S2P27469 103 aa16.34■□□□□ 0.21
PVT1-212ENST00000521951 LINC00310P59036 64 aa16.34■□□□□ 0.21
PVT1-212ENST00000521951 TIMM21Q9BVV7 248 aa16.34■□□□□ 0.21
PVT1-212ENST00000521951 K7EP13 123 aa16.33■□□□□ 0.2
PVT1-212ENST00000521951 SERF1AO75920 110 aa16.33■□□□□ 0.2
PVT1-212ENST00000521951 ZNF25P17030 456 aaPredicted RBP16.33■□□□□ 0.2
PVT1-212ENST00000521951 KLK12Q9UKR0 248 aa16.33■□□□□ 0.2
PVT1-212ENST00000521951 ANGP03950 147 aaKnown RBP16.32■□□□□ 0.2
PVT1-212ENST00000521951 SMAGPQ0VAQ4 97 aa16.32■□□□□ 0.2
PVT1-212ENST00000521951 TTC32Q5I0X7 151 aa16.32■□□□□ 0.2
PVT1-212ENST00000521951 C10orf126Q8N4M7 172 aa16.32■□□□□ 0.2
PVT1-212ENST00000521951 TOMM6Q96B49 74 aa16.32■□□□□ 0.2
PVT1-212ENST00000521951 TMEM101Q96IK0 257 aa16.32■□□□□ 0.2
PVT1-212ENST00000521951 PMCHL1Q16048 86 aa16.31■□□□□ 0.2
PVT1-212ENST00000521951 DGAT2L7PQ6IED9 249 aa16.31■□□□□ 0.2
PVT1-212ENST00000521951 CSDC2Q9Y534 153 aaKnown RBP16.31■□□□□ 0.2
PVT1-212ENST00000521951 A0A096LNJ9 63 aa16.3■□□□□ 0.2
PVT1-212ENST00000521951 NUPR1O60356 82 aa16.3■□□□□ 0.2
PVT1-212ENST00000521951 Q6ZR54 194 aa16.3■□□□□ 0.2
PVT1-212ENST00000521951 OR5A1Q8NGJ0 315 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms