RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 LRP1BQ9NZR2 4599 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 PPP1R17O96001 155 aa12.25□□□□□ -0.45
VEGFA-222ENST00000520948 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
VEGFA-222ENST00000520948 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
VEGFA-222ENST00000520948 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
VEGFA-222ENST00000520948 PPBPP02775 128 aa12.24□□□□□ -0.45
VEGFA-222ENST00000520948 BTF3P20290 206 aaKnown RBP12.24□□□□□ -0.45
VEGFA-222ENST00000520948 CKS2P33552 79 aa12.24□□□□□ -0.45
VEGFA-222ENST00000520948 Q8N3U1 123 aa12.24□□□□□ -0.45
VEGFA-222ENST00000520948 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
VEGFA-222ENST00000520948 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
VEGFA-222ENST00000520948 D6R8Y8 96 aa12.23□□□□□ -0.45
VEGFA-222ENST00000520948 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 I3L3M4 83 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 SUMO2P61956 95 aaKnown RBP12.22□□□□□ -0.45
VEGFA-222ENST00000520948 RPL32P62910 135 aaKnown RBP12.22□□□□□ -0.45
VEGFA-222ENST00000520948 COTL1Q14019 142 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 ELOBQ15370 118 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
VEGFA-222ENST00000520948 IBA57-AS1B1ANH7 110 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 PHOX2AO14813 284 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 YPEL4Q96NS1 127 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
VEGFA-222ENST00000520948 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 VCYO14598 125 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 NPYP01303 97 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 PMCHP20382 165 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 COX19Q49B96 90 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 C10orf126Q8N4M7 172 aa12.2□□□□□ -0.46
VEGFA-222ENST00000520948 TSHBP01222 138 aa12.19□□□□□ -0.46
VEGFA-222ENST00000520948 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
VEGFA-222ENST00000520948 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
VEGFA-222ENST00000520948 TMEM243Q9BU79 118 aa12.19□□□□□ -0.46
VEGFA-222ENST00000520948 APOBP04114 4563 aaKnown RBP12.19□□□□□ -0.46
VEGFA-222ENST00000520948 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
VEGFA-222ENST00000520948 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
VEGFA-222ENST00000520948 ESDP10768 282 aa12.18□□□□□ -0.46
VEGFA-222ENST00000520948 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
VEGFA-222ENST00000520948 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 AMTP48728 403 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 PKIAP61925 76 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 GAGE6Q13070 117 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 MPV17L2Q567V2 206 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-222ENST00000520948 Q8N1X5 172 aa12.17□□□□□ -0.46
VEGFA-222ENST00000520948 A0A087WX48 190 aa12.16□□□□□ -0.46
VEGFA-222ENST00000520948 A0A1B0GUV1 79 aa12.16□□□□□ -0.46
VEGFA-222ENST00000520948 LAGE3Q14657 143 aa12.16□□□□□ -0.46
VEGFA-222ENST00000520948 H7C423 109 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 APCSP02743 223 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 MT-ND6P03923 174 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 RBX1P62877 108 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 SMIM2Q9BVW6 85 aa12.15□□□□□ -0.46
VEGFA-222ENST00000520948 KIAA1644Q3SXP7 199 aa12.14□□□□□ -0.47
VEGFA-222ENST00000520948 Q8N976 141 aa12.14□□□□□ -0.47
VEGFA-222ENST00000520948 SMCO4Q9NRQ5 59 aa12.14□□□□□ -0.47
VEGFA-222ENST00000520948 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
VEGFA-222ENST00000520948 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
VEGFA-222ENST00000520948 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
VEGFA-222ENST00000520948 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
VEGFA-222ENST00000520948 ENHOQ6UWT2 76 aa12.12□□□□□ -0.47
VEGFA-222ENST00000520948 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
VEGFA-222ENST00000520948 C20orf203Q8NBC4 194 aa12.12□□□□□ -0.47
VEGFA-222ENST00000520948 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
VEGFA-222ENST00000520948 IGLV4-60A0A075B6I1 120 aa12.11□□□□□ -0.47
VEGFA-222ENST00000520948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-222ENST00000520948 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-222ENST00000520948 TCAPO15273 167 aa12.11□□□□□ -0.47
VEGFA-222ENST00000520948 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-222ENST00000520948 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
VEGFA-222ENST00000520948 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
VEGFA-222ENST00000520948 UBE2L6O14933 153 aa12.1□□□□□ -0.47
VEGFA-222ENST00000520948 FCER1GP30273 86 aa12.1□□□□□ -0.47
VEGFA-222ENST00000520948 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
VEGFA-222ENST00000520948 ANGP03950 147 aaKnown RBP12.09□□□□□ -0.47
VEGFA-222ENST00000520948 FGF6P10767 208 aa12.09□□□□□ -0.47
VEGFA-222ENST00000520948 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
VEGFA-222ENST00000520948 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
VEGFA-222ENST00000520948 Q8N8P6 123 aa12.09□□□□□ -0.47
VEGFA-222ENST00000520948 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
VEGFA-222ENST00000520948 LOC389332A0A1B0GUA5 103 aa12.08□□□□□ -0.48
VEGFA-222ENST00000520948 Q0VG73 95 aa12.08□□□□□ -0.48
VEGFA-222ENST00000520948 UBE2WQ96B02 151 aa12.08□□□□□ -0.48
VEGFA-222ENST00000520948 Q9HAA7 133 aa12.08□□□□□ -0.48
VEGFA-222ENST00000520948 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
VEGFA-222ENST00000520948 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.483e-8■□□□□ 10.5
VEGFA-222ENST00000520948 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
VEGFA-222ENST00000520948 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-222ENST00000520948 REG3AQ06141 175 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms