RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CNBPP62633 177 aaKnown RBP12.6□□□□□ -0.39
PABPC1-215ENST00000520804 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
PABPC1-215ENST00000520804 hDV102S1A0JD36 115 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 BCL2P10415 239 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 CTRLP40313 264 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 WDR73Q6P4I2 378 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
PABPC1-215ENST00000520804 HNRNPA3P51991 378 aaKnown RBP12.58□□□□□ -0.4
PABPC1-215ENST00000520804 UBE2L6O14933 153 aa12.57□□□□□ -0.4
PABPC1-215ENST00000520804 AMTP48728 403 aa12.57□□□□□ -0.4
PABPC1-215ENST00000520804 COTL1Q14019 142 aa12.57□□□□□ -0.4
PABPC1-215ENST00000520804 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
PABPC1-215ENST00000520804 CIRBPQ14011 172 aaKnown RBP12.56□□□□□ -0.4
PABPC1-215ENST00000520804 TWIST1Q15672 202 aa12.56□□□□□ -0.4
PABPC1-215ENST00000520804 AP5S1Q9NUS5 200 aa12.55□□□□□ -0.4
PABPC1-215ENST00000520804 IGHV3-64A0A075B6Q5 118 aa12.54□□□□□ -0.4
PABPC1-215ENST00000520804 SLPIP03973 132 aa12.54□□□□□ -0.4
PABPC1-215ENST00000520804 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
PABPC1-215ENST00000520804 SLC51BQ86UW2 128 aa12.54□□□□□ -0.4
PABPC1-215ENST00000520804 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
PABPC1-215ENST00000520804 RNASE7Q9H1E1 156 aaKnown RBP12.54□□□□□ -0.4
PABPC1-215ENST00000520804 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
PABPC1-215ENST00000520804 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-215ENST00000520804 K7EN84 100 aa12.53□□□□□ -0.4
PABPC1-215ENST00000520804 TCTE3Q8IZS6 198 aa12.53□□□□□ -0.4
PABPC1-215ENST00000520804 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.41
PABPC1-215ENST00000520804 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
PABPC1-215ENST00000520804 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
PABPC1-215ENST00000520804 C15orf56Q8N910 161 aa12.5□□□□□ -0.41
PABPC1-215ENST00000520804 GTSF1Q8WW33 167 aa12.5□□□□□ -0.41
PABPC1-215ENST00000520804 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
PABPC1-215ENST00000520804 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
PABPC1-215ENST00000520804 NCR2O95944 276 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 CFAP161Q6P656 301 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 Q6ZNX1 250 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 SPACA4Q8TDM5 124 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
PABPC1-215ENST00000520804 A0A087WYN8 130 aa12.48□□□□□ -0.41
PABPC1-215ENST00000520804 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
PABPC1-215ENST00000520804 SMIM15Q7Z3B0 74 aa12.48□□□□□ -0.41
PABPC1-215ENST00000520804 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
PABPC1-215ENST00000520804 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-215ENST00000520804 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
PABPC1-215ENST00000520804 H7C423 109 aa12.46□□□□□ -0.41
PABPC1-215ENST00000520804 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
PABPC1-215ENST00000520804 Q6ZRU5 148 aa12.46□□□□□ -0.41
PABPC1-215ENST00000520804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
PABPC1-215ENST00000520804 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
PABPC1-215ENST00000520804 APCSP02743 223 aa12.45□□□□□ -0.42
PABPC1-215ENST00000520804 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
PABPC1-215ENST00000520804 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
PABPC1-215ENST00000520804 PLAC8Q9NZF1 115 aa12.45□□□□□ -0.42
PABPC1-215ENST00000520804 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
PABPC1-215ENST00000520804 TMEM250H0YL14 139 aa12.44□□□□□ -0.42
PABPC1-215ENST00000520804 GATCO43716 136 aaKnown RBP12.44□□□□□ -0.42
PABPC1-215ENST00000520804 FGF6P10767 208 aa12.44□□□□□ -0.42
PABPC1-215ENST00000520804 RPS10P46783 165 aaKnown RBP12.44□□□□□ -0.42
PABPC1-215ENST00000520804 HIGD2BQ4VC39 106 aa12.44□□□□□ -0.42
PABPC1-215ENST00000520804 FAM231DQ6ZW35 169 aa12.44□□□□□ -0.42
PABPC1-215ENST00000520804 UBR4Q5T4S7 5183 aa12.43□□□□□ -0.42
PABPC1-215ENST00000520804 MT1HL1P0DM35 61 aa12.43□□□□□ -0.42
PABPC1-215ENST00000520804 COX6A2Q02221 97 aa12.43□□□□□ -0.42
PABPC1-215ENST00000520804 A8MWL6 223 aa12.42□□□□□ -0.42
PABPC1-215ENST00000520804 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-215ENST00000520804 TRBV6-5A0A0K0K1A5 114 aa12.41□□□□□ -0.42
PABPC1-215ENST00000520804 I3L3M4 83 aa12.41□□□□□ -0.42
PABPC1-215ENST00000520804 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
PABPC1-215ENST00000520804 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-215ENST00000520804 PMCHP20382 165 aa12.41□□□□□ -0.42
PABPC1-215ENST00000520804 FOXI1Q12951 378 aa12.41□□□□□ -0.42
PABPC1-215ENST00000520804 OR5A1Q8NGJ0 315 aa12.41□□□□□ -0.42
PABPC1-215ENST00000520804 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
PABPC1-215ENST00000520804 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
PABPC1-215ENST00000520804 CT83Q5H943 113 aa12.4□□□□□ -0.42
PABPC1-215ENST00000520804 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.42
PABPC1-215ENST00000520804 PHOX2AO14813 284 aa12.39□□□□□ -0.43
PABPC1-215ENST00000520804 ALKAL2Q6UX46 152 aa12.39□□□□□ -0.43
PABPC1-215ENST00000520804 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
PABPC1-215ENST00000520804 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
PABPC1-215ENST00000520804 IGKV2-24A0A0C4DH68 120 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 GAS8-AS1O95177 125 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 ESDP10768 282 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 BORCS7Q96B45 105 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
PABPC1-215ENST00000520804 TSHBP01222 138 aa12.37□□□□□ -0.43
PABPC1-215ENST00000520804 XCL1P47992 114 aa12.37□□□□□ -0.43
PABPC1-215ENST00000520804 CEBPGP53567 150 aa12.37□□□□□ -0.43
PABPC1-215ENST00000520804 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
PABPC1-215ENST00000520804 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
PABPC1-215ENST00000520804 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
PABPC1-215ENST00000520804 TMEM242Q9NWH2 141 aa12.36□□□□□ -0.43
PABPC1-215ENST00000520804 CCL25O15444 150 aa12.35□□□□□ -0.43
PABPC1-215ENST00000520804 STPG4Q8N801 248 aa12.35□□□□□ -0.43
PABPC1-215ENST00000520804 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
PABPC1-215ENST00000520804 MRAP2Q96G30 205 aa12.35□□□□□ -0.43
PABPC1-215ENST00000520804 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms