RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.05
PCDHGB4-201ENST00000519479 IGKV2D-26A0A0A0MRZ7 120 aa8.46□□□□□ -1.06
PCDHGB4-201ENST00000519479 PSMB8P28062 276 aa8.46□□□□□ -1.06
PCDHGB4-201ENST00000519479 E9PLD3 99 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 LINC00158P58513 81 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 Q6YL49 198 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 NRACQ8N912 160 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 FOXI1Q12951 378 aa8.45□□□□□ -1.06
PCDHGB4-201ENST00000519479 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 HIST2H2BCQ6DN03 193 aa8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 COX8CQ7Z4L0 72 aa8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
PCDHGB4-201ENST00000519479 RNASE3P12724 160 aaKnown RBP8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 PIFOQ8TCI5 191 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 C11orf68Q9H3H3 251 aaKnown RBP8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 RNF183Q96D59 192 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 C2orf91Q6ZV80 131 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 RNF152Q8N8N0 203 aa8.43□□□□□ -1.06
PCDHGB4-201ENST00000519479 LGALS9O00182 355 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 TMEM243Q9BU79 118 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 LEPROTO15243 131 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 IGHV4-4A0A075B6R2 117 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
PCDHGB4-201ENST00000519479 EDN2P20800 178 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 KRTAP10-9P60411 292 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 HERV-K104P63124 156 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 ZMAT4Q9H898 229 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 P0DMU3 169 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 CRIP2P52943 208 aaPredicted RBP8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 A0A096LNJ9 63 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 KLLNB2CW77 178 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
PCDHGB4-201ENST00000519479 GHRHP01286 108 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 CARD19Q96LW7 228 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 MTORP42345 2549 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 DNAJC9-AS1A6NH13 148 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 TRACP01848 142 aa8.4□□□□□ -1.06
PCDHGB4-201ENST00000519479 CFC1BP0CG36 223 aa8.4□□□□□ -1.07
PCDHGB4-201ENST00000519479 CFC1P0CG37 223 aa8.4□□□□□ -1.07
PCDHGB4-201ENST00000519479 ANKRD29Q8N6D5 301 aa8.4□□□□□ -1.07
PCDHGB4-201ENST00000519479 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 HERVK_113P63121 156 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 PTH2Q96A98 100 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 PAX4O43316 350 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 DNAJC30Q96LL9 226 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 ZNF702PQ9H963 129 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 RELNP78509 3460 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 SMG1Q96Q15 3661 aaKnown RBP8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 A4D1N5 150 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 APOC4P55056 127 aa8.39□□□□□ -1.07
PCDHGB4-201ENST00000519479 M0QY20 66 aa8.38□□□□□ -1.07
PCDHGB4-201ENST00000519479 DAD1P61803 113 aa8.38□□□□□ -1.07
PCDHGB4-201ENST00000519479 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
PCDHGB4-201ENST00000519479 TRAV25A0A0B4J276 109 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 LY6G6DO95868 133 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 MT-ATP8P03928 68 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 F5H768 121 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 DEFB114Q30KQ6 69 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 Q6ZUT4 128 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 C18orf65Q6ZTR6 163 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 FLNBO75369 2602 aaKnown RBP8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 Q9H8V8 135 aa8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
PCDHGB4-201ENST00000519479 ZZEF1O43149 2961 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 TRBV7-3A0A075B6L6 115 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 K7EQD1 137 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 SS18Q15532 418 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 FN1P02751 2386 aaKnown RBP8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
PCDHGB4-201ENST00000519479 ANKRD17O75179 2603 aaKnown RBP8.35□□□□□ -1.07
PCDHGB4-201ENST00000519479 RS1O15537 224 aa8.35□□□□□ -1.07
PCDHGB4-201ENST00000519479 PFN2P35080 140 aa8.35□□□□□ -1.07
PCDHGB4-201ENST00000519479 Q6ZSV7 163 aa8.35□□□□□ -1.07
PCDHGB4-201ENST00000519479 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms