RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 HLA-DQA1P01909 254 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 ORM1P02763 201 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 ESDP10768 282 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 Q0VG73 95 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 FAM159AQ6UWV7 190 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 TMEM136Q6ZRR5 245 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 TMEM18Q96B42 140 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 GFRA4Q9GZZ7 299 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 RPP21Q9H633 154 aaKnown RBP5.97□□□□□ -1.45
NUP54-211ENST00000512151 Q9HAA7 133 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 NAT8BQ9UHF3 227 aa5.97□□□□□ -1.45
NUP54-211ENST00000512151 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.96□□□□□ -1.45
NUP54-211ENST00000512151 GHRHP01286 108 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 GZMBP10144 247 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.45
NUP54-211ENST00000512151 TCL1AP56279 114 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 DAZ2Q13117 558 aaKnown RBP5.96□□□□□ -1.45
NUP54-211ENST00000512151 ATP5L2Q7Z4Y8 100 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 NUP35Q8NFH5 326 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 KCNS1Q96KK3 526 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 GSN-AS1Q9NRJ2 163 aa5.96□□□□□ -1.45
NUP54-211ENST00000512151 TRGV2A0A075B6R0 118 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 A8MWL6 223 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 P01737 135 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 IGHV3-53P01767 116 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 JOSD1Q15040 202 aaPredicted RBP5.95□□□□□ -1.46
NUP54-211ENST00000512151 MRPL54Q6P161 138 aaKnown RBP5.95□□□□□ -1.46
NUP54-211ENST00000512151 NEGR1Q7Z3B1 354 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 C10orf126Q8N4M7 172 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 OR2D3Q8NGH3 330 aa5.95□□□□□ -1.46
NUP54-211ENST00000512151 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 A0A1B0GXF2 115 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 IBA57-AS1B1ANH7 110 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 CRYBA4P53673 196 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 FOXA3P55318 350 aaPredicted RBP5.94□□□□□ -1.46
NUP54-211ENST00000512151 MRPL23Q16540 153 aaKnown RBP5.94□□□□□ -1.46
NUP54-211ENST00000512151 OR10J3Q5JRS4 329 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 Q6ZRU5 148 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 C9orf85Q96MD7 179 aa5.94□□□□□ -1.46
NUP54-211ENST00000512151 TRGV1A0A0A0MS02 117 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 H3BVH4 76 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 NUPR1O60356 82 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 SPINK4O60575 86 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 APCSP02743 223 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 IGLC6P0CF74 106 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 LINC00310P59036 64 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 GTSF1Q8WW33 167 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 MUC21A0A0G2JKD1 596 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 MUC21A0A140T8X8 626 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 K7EQD1 137 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 SNAI2O43623 268 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 HBBP68871 147 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 FHL2Q14192 279 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 SSBP4Q9BWG4 385 aaPredicted RBP5.93□□□□□ -1.46
NUP54-211ENST00000512151 MRPL16Q9NX20 251 aaKnown RBP5.93□□□□□ -1.46
NUP54-211ENST00000512151 PRO0255Q9UI72 69 aa5.93□□□□□ -1.46
NUP54-211ENST00000512151 A0A1B0GW15 77 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 SERF1AO75920 110 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 GYPEP15421 78 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
NUP54-211ENST00000512151 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
NUP54-211ENST00000512151 RAB4BP61018 213 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 SLAQ13239 276 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 BAGE3Q86Y29 109 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 GATD1Q8NB37 220 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 SPXQ9BT56 116 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 HHLA3Q9XRX5 114 aa5.92□□□□□ -1.46
NUP54-211ENST00000512151 M0R2P5 195 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 OR5AL1P0C617 328 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 SRIP30626 198 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 SSTP61278 116 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 KIAA1644Q3SXP7 199 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 LYZL1Q6UWQ5 148 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 FER1L6-AS1Q8NA97 138 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 OR10AG1Q8NH19 301 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 RASL10AQ92737 203 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 JPT2Q9H910 190 aa5.91□□□□□ -1.46
NUP54-211ENST00000512151 IGHV3-38A0A0C4DH36 116 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 LINC00587B1AMM8 73 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 F2Z2F3 143 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 PKIAP61925 76 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 IQCJQ1A5X6 159 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 ZNF876PQ49A33 203 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 C18orf32Q8TCD1 76 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 BAALCQ8WXS3 180 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 PTH2Q96A98 100 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 PGLYRP4Q96LB8 373 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 ALKBH7Q9BT30 221 aaPredicted RBP5.9□□□□□ -1.47
NUP54-211ENST00000512151 TPPP3Q9BW30 176 aa5.9□□□□□ -1.47
NUP54-211ENST00000512151 M0R381 172 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 IGHV3-30P01768 117 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 IGHV3-30-3P0DP02 117 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 IGHV3-30-5P0DP03 117 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 CTRLP40313 264 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms