RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RAB14P61106 215 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 BAALCQ8WXS3 180 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 IGKV2D-24A0A075B6R9 120 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 ANGP03950 147 aaKnown RBP11.97□□□□□ -0.49
CLDND1-220ENST00000508902 RIGQ13278 110 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 SMIM15Q7Z3B0 74 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 NRACQ8N912 160 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
CLDND1-220ENST00000508902 EREGO14944 169 aa11.96□□□□□ -0.49
CLDND1-220ENST00000508902 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.49
CLDND1-220ENST00000508902 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
CLDND1-220ENST00000508902 AMTP48728 403 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 COTL1Q14019 142 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 ELOBQ15370 118 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 MRPL51Q4U2R6 128 aaKnown RBP11.95□□□□□ -0.5
CLDND1-220ENST00000508902 KCNIP4Q6PIL6 250 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 LINC00269Q8N2A0 174 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 TMEM70Q9BUB7 260 aa11.95□□□□□ -0.5
CLDND1-220ENST00000508902 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
CLDND1-220ENST00000508902 TSHBP01222 138 aa11.94□□□□□ -0.5
CLDND1-220ENST00000508902 POLR2KP53803 58 aaKnown RBP11.94□□□□□ -0.5
CLDND1-220ENST00000508902 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
CLDND1-220ENST00000508902 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-220ENST00000508902 IGKV2-29A2NJV5 120 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-220ENST00000508902 CAMPP49913 170 aa11.93□□□□□ -0.5
CLDND1-220ENST00000508902 FAM104BQ5XKR9 115 aa11.93□□□□□ -0.5
CLDND1-220ENST00000508902 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
CLDND1-220ENST00000508902 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
CLDND1-220ENST00000508902 XGP55808 180 aa11.92□□□□□ -0.5
CLDND1-220ENST00000508902 PKIAP61925 76 aa11.92□□□□□ -0.5
CLDND1-220ENST00000508902 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
CLDND1-220ENST00000508902 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
CLDND1-220ENST00000508902 IGLV5-52A0A0A0MRZ9 124 aa11.91□□□□□ -0.5
CLDND1-220ENST00000508902 ESDP10768 282 aa11.91□□□□□ -0.5
CLDND1-220ENST00000508902 Q0VG73 95 aa11.91□□□□□ -0.5
CLDND1-220ENST00000508902 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-220ENST00000508902 CRPP02741 224 aa11.9□□□□□ -0.5
CLDND1-220ENST00000508902 MIAQ16674 131 aa11.9□□□□□ -0.5
CLDND1-220ENST00000508902 RMI2Q96E14 147 aa11.9□□□□□ -0.5
CLDND1-220ENST00000508902 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
CLDND1-220ENST00000508902 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
CLDND1-220ENST00000508902 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 TRBV27A0A0K0K1C4 114 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 I3L3M4 83 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 GCSHP23434 173 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 HBBP68871 147 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 HAMPP81172 84 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 REG3AQ06141 175 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 PNRC1Q12796 327 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-220ENST00000508902 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
CLDND1-220ENST00000508902 TMEM218A2RU14 115 aa11.88□□□□□ -0.51
CLDND1-220ENST00000508902 APCSP02743 223 aa11.88□□□□□ -0.51
CLDND1-220ENST00000508902 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
CLDND1-220ENST00000508902 PMCHP20382 165 aa11.87□□□□□ -0.51
CLDND1-220ENST00000508902 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
CLDND1-220ENST00000508902 A0A1B0GW15 77 aa11.86□□□□□ -0.51
CLDND1-220ENST00000508902 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
CLDND1-220ENST00000508902 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
CLDND1-220ENST00000508902 FGF6P10767 208 aa11.86□□□□□ -0.51
CLDND1-220ENST00000508902 SUMO2P61956 95 aaKnown RBP11.86□□□□□ -0.51
CLDND1-220ENST00000508902 COMMD7Q86VX2 200 aa11.86□□□□□ -0.51
CLDND1-220ENST00000508902 USP17L23D6RBM5 183 aa11.85□□□□□ -0.51
CLDND1-220ENST00000508902 UBE2L6O14933 153 aa11.85□□□□□ -0.51
CLDND1-220ENST00000508902 NPYP01303 97 aa11.85□□□□□ -0.51
CLDND1-220ENST00000508902 ANAPC16Q96DE5 110 aa11.85□□□□□ -0.51
CLDND1-220ENST00000508902 TRBV24-1A0A075B6N3 115 aa11.84□□□□□ -0.51
CLDND1-220ENST00000508902 D6R8Y8 96 aa11.84□□□□□ -0.51
CLDND1-220ENST00000508902 ATP5L2Q7Z4Y8 100 aa11.84□□□□□ -0.51
CLDND1-220ENST00000508902 LINC00862A6NCI5 91 aa11.83□□□□□ -0.52
CLDND1-220ENST00000508902 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
CLDND1-220ENST00000508902 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
CLDND1-220ENST00000508902 PRSS1P07477 247 aa11.83□□□□□ -0.52
CLDND1-220ENST00000508902 F8W036 122 aa11.82□□□□□ -0.52
CLDND1-220ENST00000508902 H7C423 109 aa11.82□□□□□ -0.52
CLDND1-220ENST00000508902 CKS2P33552 79 aa11.82□□□□□ -0.52
CLDND1-220ENST00000508902 RNASEKQ6P5S7 137 aaKnown RBP11.82□□□□□ -0.52
CLDND1-220ENST00000508902 Q6ZSA8 131 aa11.82□□□□□ -0.52
CLDND1-220ENST00000508902 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
CLDND1-220ENST00000508902 VCYO14598 125 aa11.81□□□□□ -0.52
CLDND1-220ENST00000508902 RPL32P62910 135 aaKnown RBP11.81□□□□□ -0.52
CLDND1-220ENST00000508902 C10orf91Q5T1B1 145 aa11.81□□□□□ -0.52
CLDND1-220ENST00000508902 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
CLDND1-220ENST00000508902 Q8N1X5 172 aa11.81□□□□□ -0.52
CLDND1-220ENST00000508902 C7orf77A4D0Y5 90 aa11.8□□□□□ -0.52
CLDND1-220ENST00000508902 AMMECR1LQ6DCA0 310 aa11.8□□□□□ -0.52
CLDND1-220ENST00000508902 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
CLDND1-220ENST00000508902 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
CLDND1-220ENST00000508902 SEC11CQ9BY50 192 aa11.8□□□□□ -0.52
CLDND1-220ENST00000508902 TRAV8-4A0A0B4J246 113 aa11.79□□□□□ -0.52
CLDND1-220ENST00000508902 S100A8P05109 93 aa11.79□□□□□ -0.52
CLDND1-220ENST00000508902 C20orf78Q9BR46 151 aa11.79□□□□□ -0.52
CLDND1-220ENST00000508902 PPP1R17O96001 155 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms