RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 FAM30AQ9NZY2 134 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 MYCBP2O75592 4640 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
LMNA-222ENST00000508500 RAB5BP61020 215 aa10.73□□□□□ -0.69
LMNA-222ENST00000508500 HBBP68871 147 aa10.73□□□□□ -0.69
LMNA-222ENST00000508500 NIT1Q86X76 327 aa10.73□□□□□ -0.69
LMNA-222ENST00000508500 PGLYRP4Q96LB8 373 aa10.73□□□□□ -0.69
LMNA-222ENST00000508500 INAFM2P0DMQ5 153 aa10.72□□□□□ -0.69
LMNA-222ENST00000508500 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
LMNA-222ENST00000508500 ZFP82Q8N141 532 aa10.72□□□□□ -0.69
LMNA-222ENST00000508500 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
LMNA-222ENST00000508500 GZMBP10144 247 aa10.71□□□□□ -0.69
LMNA-222ENST00000508500 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
LMNA-222ENST00000508500 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
LMNA-222ENST00000508500 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
LMNA-222ENST00000508500 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
LMNA-222ENST00000508500 TRAV8-3A0A0A6YYJ7 113 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 LECT2O14960 151 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 UBE2D3P61077 147 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 UBE2D2P62837 147 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 TMEM136Q6ZRR5 245 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 FRZBQ92765 325 aa10.7□□□□□ -0.7
LMNA-222ENST00000508500 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
LMNA-222ENST00000508500 TRGC2P03986 189 aa10.69□□□□□ -0.7
LMNA-222ENST00000508500 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
LMNA-222ENST00000508500 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
LMNA-222ENST00000508500 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
LMNA-222ENST00000508500 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
LMNA-222ENST00000508500 PHOX2AO14813 284 aa10.68□□□□□ -0.7
LMNA-222ENST00000508500 MRPL18Q9H0U6 180 aaKnown RBP10.68□□□□□ -0.7
LMNA-222ENST00000508500 KLK12Q9UKR0 248 aa10.68□□□□□ -0.7
LMNA-222ENST00000508500 RAB4BP61018 213 aa10.67□□□□□ -0.7
LMNA-222ENST00000508500 RPL36AP83881 106 aaKnown RBP10.67□□□□□ -0.7
LMNA-222ENST00000508500 FABP9Q0Z7S8 132 aa10.67□□□□□ -0.7
LMNA-222ENST00000508500 SMIM15Q7Z3B0 74 aa10.67□□□□□ -0.7
LMNA-222ENST00000508500 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
LMNA-222ENST00000508500 RPL36ALQ969Q0 106 aaKnown RBP10.67□□□□□ -0.7
LMNA-222ENST00000508500 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
LMNA-222ENST00000508500 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.66□□□□□ -0.7
LMNA-222ENST00000508500 APCSP02743 223 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 TRGC1P0CF51 173 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 NTF3P20783 257 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 CAMPP49913 170 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 Q6ZSA8 131 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
LMNA-222ENST00000508500 TWIST1Q15672 202 aa10.65□□□□□ -0.7
LMNA-222ENST00000508500 LINC01620Q4KN68 170 aa10.65□□□□□ -0.7
LMNA-222ENST00000508500 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
LMNA-222ENST00000508500 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
LMNA-222ENST00000508500 SSTP61278 116 aa10.64□□□□□ -0.71
LMNA-222ENST00000508500 ZNF56Q15929 161 aa10.64□□□□□ -0.71
LMNA-222ENST00000508500 UBE2WQ96B02 151 aa10.64□□□□□ -0.71
LMNA-222ENST00000508500 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
LMNA-222ENST00000508500 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
LMNA-222ENST00000508500 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 NTM-AS1Q6ZSK4 140 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
LMNA-222ENST00000508500 A0A087WX48 190 aa10.62□□□□□ -0.71
LMNA-222ENST00000508500 PPBPP02775 128 aa10.62□□□□□ -0.71
LMNA-222ENST00000508500 S100A6P06703 90 aa10.62□□□□□ -0.71
LMNA-222ENST00000508500 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
LMNA-222ENST00000508500 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
LMNA-222ENST00000508500 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
LMNA-222ENST00000508500 COA6Q5JTJ3 125 aaKnown RBP10.61□□□□□ -0.71
LMNA-222ENST00000508500 AP1S3Q96PC3 154 aa10.61□□□□□ -0.71
LMNA-222ENST00000508500 Q0VG73 95 aa10.6□□□□□ -0.71
LMNA-222ENST00000508500 RMI2Q96E14 147 aa10.6□□□□□ -0.71
LMNA-222ENST00000508500 LAMTOR2Q9Y2Q5 125 aa10.6□□□□□ -0.71
LMNA-222ENST00000508500 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
LMNA-222ENST00000508500 F5H697 171 aa10.59□□□□□ -0.71
LMNA-222ENST00000508500 Q8N976 141 aa10.59□□□□□ -0.71
LMNA-222ENST00000508500 DPH3P1Q9H4G8 78 aa10.59□□□□□ -0.71
LMNA-222ENST00000508500 ALKBH7Q9BT30 221 aaPredicted RBP10.58□□□□□ -0.72
LMNA-222ENST00000508500 PPP1R17O96001 155 aa10.57□□□□□ -0.72
LMNA-222ENST00000508500 SMIM17P0DL12 118 aa10.57□□□□□ -0.72
LMNA-222ENST00000508500 RAB4AP20338 218 aa10.57□□□□□ -0.72
LMNA-222ENST00000508500 ORMDL3Q8N138 153 aa10.57□□□□□ -0.72
LMNA-222ENST00000508500 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
LMNA-222ENST00000508500 C5orf52A6NGY3 159 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 M0QY20 66 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 MRPL51Q4U2R6 128 aaKnown RBP10.56□□□□□ -0.72
LMNA-222ENST00000508500 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 AMN1Q8IY45 258 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 CHCHD5Q9BSY4 110 aa10.56□□□□□ -0.72
LMNA-222ENST00000508500 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms