RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 EREGO14944 169 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
SMN1-204ENST00000506163 CAMPP49913 170 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 COTL1Q14019 142 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 NCR2O95944 276 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
SMN1-204ENST00000506163 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 LECT2O14960 151 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 AMTP48728 403 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
SMN1-204ENST00000506163 MRPL51Q4U2R6 128 aaKnown RBP11.78□□□□□ -0.52
SMN1-204ENST00000506163 Q8N814 137 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 NRACQ8N912 160 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 TMEM218A2RU14 115 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 PKIAP61925 76 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 PNRC1Q12796 327 aaPredicted RBP11.77□□□□□ -0.52
SMN1-204ENST00000506163 UQCC3Q6UW78 93 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 LINC00269Q8N2A0 174 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 KRTAP10-1P60331 282 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 Q0VG73 95 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 I3L3M4 83 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 TSHBP01222 138 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 RMI2Q96E14 147 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 A0A1B0GW15 77 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 PMCHP20382 165 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 HBBP68871 147 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
SMN1-204ENST00000506163 TRBV27A0A0K0K1C4 114 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
SMN1-204ENST00000506163 MT-ND4LP03901 98 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 F8W036 122 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 CRPP02741 224 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 ESDP10768 282 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 REG3AQ06141 175 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 MIAQ16674 131 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 LINC00862A6NCI5 91 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 UBE2L6O14933 153 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 APCSP02743 223 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 IGLV5-52A0A0A0MRZ9 124 aa11.71□□□□□ -0.53
SMN1-204ENST00000506163 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
SMN1-204ENST00000506163 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 FGF6P10767 208 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
SMN1-204ENST00000506163 DNAH8Q96JB1 4490 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 D6R8Y8 96 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 VCYO14598 125 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 GCSHP23434 173 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 CKS2P33552 79 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 SEC11CQ9BY50 192 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.69□□□□□ -0.54
SMN1-204ENST00000506163 H7C423 109 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 S100A8P05109 93 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 PPP1R17O96001 155 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 NPYP01303 97 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 XGP55808 180 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 RNASEKQ6P5S7 137 aaKnown RBP11.68□□□□□ -0.54
SMN1-204ENST00000506163 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
SMN1-204ENST00000506163 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
SMN1-204ENST00000506163 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
SMN1-204ENST00000506163 AMMECR1LQ6DCA0 310 aa11.66□□□□□ -0.54
SMN1-204ENST00000506163 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
SMN1-204ENST00000506163 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
SMN1-204ENST00000506163 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
SMN1-204ENST00000506163 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 PPBPP02775 128 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 PRSS1P07477 247 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 FCER1GP30273 86 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
SMN1-204ENST00000506163 KIR2DL4Q99706 377 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 SMIM2Q9BVW6 85 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms