RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 SULT1A2P50226 295 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPN20-216ENST00000506080 INO80EQ8NBZ0 244 aaPredicted RBP5.7□□□□□ -1.5
PTPN20-216ENST00000506080 AQP10Q96PS8 301 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 MARVELD1Q9BSK0 173 aa5.7□□□□□ -1.5
PTPN20-216ENST00000506080 NKX6-2Q9C056 277 aaPredicted RBP5.7□□□□□ -1.5
PTPN20-216ENST00000506080 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 SNAI2O43623 268 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 UPK1BO75841 260 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 MGPP08493 103 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 AKR1C3P42330 323 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 IFITM3Q01628 133 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 CFAP161Q6P656 301 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
PTPN20-216ENST00000506080 CXCL1P09341 107 aa5.68□□□□□ -1.5
PTPN20-216ENST00000506080 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
PTPN20-216ENST00000506080 CST9LP1Q5W188 147 aa5.68□□□□□ -1.5
PTPN20-216ENST00000506080 RPL7L1Q6DKI1 246 aaKnown RBP5.68□□□□□ -1.5
PTPN20-216ENST00000506080 AP1S3Q96PC3 154 aa5.68□□□□□ -1.5
PTPN20-216ENST00000506080 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
PTPN20-216ENST00000506080 H7C1H1 209 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 M0QY20 66 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 UBE2L6O14933 153 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 OR5AL1P0C617 328 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 Q6ZRP5 223 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 STOML3Q8TAV4 291 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 S100ZQ8WXG8 99 aa5.67□□□□□ -1.5
PTPN20-216ENST00000506080 MAP1LC3B2A6NCE7 125 aa5.66□□□□□ -1.5
PTPN20-216ENST00000506080 AKR1C8PQ5T2L2 129 aa5.66□□□□□ -1.5
PTPN20-216ENST00000506080 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
PTPN20-216ENST00000506080 MAP1LC3BQ9GZQ8 125 aa5.66□□□□□ -1.5
PTPN20-216ENST00000506080 MUC2Q02817 5179 aa5.66□□□□□ -1.5
PTPN20-216ENST00000506080 BORCS7-ASMTA0A0B4J1R7 106 aa5.65□□□□□ -1.5
PTPN20-216ENST00000506080 AMTP48728 403 aa5.65□□□□□ -1.5
PTPN20-216ENST00000506080 LINC00526Q96FQ7 95 aa5.65□□□□□ -1.5
PTPN20-216ENST00000506080 TPPP3Q9BW30 176 aa5.65□□□□□ -1.5
PTPN20-216ENST00000506080 GVQW2A0A096LPI5 108 aaPredicted RBP5.65□□□□□ -1.51
PTPN20-216ENST00000506080 FAM231BA6NCW3 169 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 PAGE4O60829 102 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 FHITP49789 147 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 Q5BKY6 102 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 BAGE2Q86Y30 109 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.51
PTPN20-216ENST00000506080 TCEAL7Q9BRU2 100 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 MLST8Q9BVC4 326 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 NDUFA13Q9P0J0 144 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 LINC00474Q9P2X8 69 aa5.65□□□□□ -1.51
PTPN20-216ENST00000506080 COTL1Q14019 142 aa5.64□□□□□ -1.51
PTPN20-216ENST00000506080 RASL11AQ6T310 242 aa5.64□□□□□ -1.51
PTPN20-216ENST00000506080 LINC00299Q6ZSB3 139 aa5.64□□□□□ -1.51
PTPN20-216ENST00000506080 PGLYRP4Q96LB8 373 aa5.64□□□□□ -1.51
PTPN20-216ENST00000506080 ALG5Q9Y673 324 aa5.64□□□□□ -1.51
PTPN20-216ENST00000506080 S100A9P06702 114 aaKnown RBP5.63□□□□□ -1.51
PTPN20-216ENST00000506080 NIT2Q9NQR4 276 aa5.63□□□□□ -1.51
PTPN20-216ENST00000506080 A0A1B0GV50 99 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 DEFA1P59665 94 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 FOXI1Q12951 378 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 AMMECR1LQ6DCA0 310 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 RNASEKQ6P5S7 137 aaKnown RBP5.62□□□□□ -1.51
PTPN20-216ENST00000506080 PRR26Q8N8Z3 221 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
PTPN20-216ENST00000506080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
PTPN20-216ENST00000506080 FXYD6-FXYD2A0A087WZ82 144 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
PTPN20-216ENST00000506080 IGLC6P0CF74 106 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 XCL1P47992 114 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 GAGE2BQ13066 116 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 FER1L6-AS1Q8NA97 138 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 PSORS1C2Q9UIG4 136 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 PKIGQ9Y2B9 76 aa5.61□□□□□ -1.51
PTPN20-216ENST00000506080 A0A1W2PNN7 141 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 PFDN1O60925 122 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 MT-ND6P03923 174 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 CACNG7P62955 275 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 SYCNQ0VAF6 134 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 OR2D3Q8NGH3 330 aa5.6□□□□□ -1.51
PTPN20-216ENST00000506080 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 CCL25O15444 150 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 NTF3P20783 257 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 PRR4Q16378 134 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 C1orf137Q5JT78 98 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 Q6ZNX1 250 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 TMUB2Q71RG4 321 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 MED28Q9H204 178 aa5.59□□□□□ -1.51
PTPN20-216ENST00000506080 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
PTPN20-216ENST00000506080 TRGC1P0CF51 173 aa5.58□□□□□ -1.52
PTPN20-216ENST00000506080 FGF6P10767 208 aa5.58□□□□□ -1.52
PTPN20-216ENST00000506080 RPL35P42766 123 aaKnown RBP5.58□□□□□ -1.52
PTPN20-216ENST00000506080 LYZL1Q6UWQ5 148 aa5.58□□□□□ -1.52
PTPN20-216ENST00000506080 OR5A1Q8NGJ0 315 aa5.58□□□□□ -1.52
PTPN20-216ENST00000506080 SFT2D1Q8WV19 159 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms