RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 Q6ZSN1 163 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 DAZ4Q86SG3 579 aaKnown RBP12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 CITED1Q99966 193 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 DAZ3Q9NR90 486 aaKnown RBP12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 H3BRM9 83 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 AMELXQ99217 191 aa12.42□□□□□ -0.42
TRAPPC11-204ENST00000505676 TM2D2Q9BX73 214 aa12.41□□□□□ -0.42
TRAPPC11-204ENST00000505676 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
TRAPPC11-204ENST00000505676 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
TRAPPC11-204ENST00000505676 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
TRAPPC11-204ENST00000505676 NOP10Q9NPE3 64 aaKnown RBP12.4□□□□□ -0.42
TRAPPC11-204ENST00000505676 MTORP42345 2549 aa12.4□□□□□ -0.42
TRAPPC11-204ENST00000505676 PLAC8L1A1L4L8 177 aa12.39□□□□□ -0.43
TRAPPC11-204ENST00000505676 MRPS36P82909 103 aaKnown RBP12.39□□□□□ -0.43
TRAPPC11-204ENST00000505676 Q6ZTI0 123 aa12.39□□□□□ -0.43
TRAPPC11-204ENST00000505676 NACAE9PAV3 2078 aa12.39□□□□□ -0.43
TRAPPC11-204ENST00000505676 GCN1Q92616 2671 aaKnown RBP12.39□□□□□ -0.43
TRAPPC11-204ENST00000505676 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 CEND1Q8N111 149 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 ZNF479Q96JC4 524 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
TRAPPC11-204ENST00000505676 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 TTTY13Q9BZ97 58 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 ZNF815PA8K554 130 aa12.37□□□□□ -0.43
TRAPPC11-204ENST00000505676 UBE2V1Q13404 147 aa12.36□□□□□ -0.43
TRAPPC11-204ENST00000505676 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC11-204ENST00000505676 PLEKHB2Q96CS7 222 aa12.36□□□□□ -0.43
TRAPPC11-204ENST00000505676 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
TRAPPC11-204ENST00000505676 CSDC2Q9Y534 153 aaKnown RBP12.36□□□□□ -0.43
TRAPPC11-204ENST00000505676 LEPROTO15243 131 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 GCSHP23434 173 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 UBE2D3P61077 147 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 UBE2D2P62837 147 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
TRAPPC11-204ENST00000505676 C9orf118A6NHY6 69 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 H7C423 109 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 WIPF1O43516 503 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 ZNF22P17026 224 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 PTTG1IPP53801 180 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 VAMP3Q15836 100 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
TRAPPC11-204ENST00000505676 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 APOC4P55056 127 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 TMEM238LA0A1B0GVL6 79 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 A6NJY4 79 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE7O76087 117 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 PHLDA1Q8WV24 401 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC11-204ENST00000505676 J3QQQ9 107 aa12.32□□□□□ -0.44
TRAPPC11-204ENST00000505676 EMP1P54849 157 aa12.32□□□□□ -0.44
TRAPPC11-204ENST00000505676 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
TRAPPC11-204ENST00000505676 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC11-204ENST00000505676 Q9UF83 564 aa12.31□□□□□ -0.44
TRAPPC11-204ENST00000505676 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
TRAPPC11-204ENST00000505676 FXYD2P54710 66 aa12.31□□□□□ -0.44
TRAPPC11-204ENST00000505676 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
TRAPPC11-204ENST00000505676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-204ENST00000505676 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
TRAPPC11-204ENST00000505676 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
TRAPPC11-204ENST00000505676 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-204ENST00000505676 TIRAPP58753 221 aa12.3□□□□□ -0.44
TRAPPC11-204ENST00000505676 FAM19A3Q7Z5A8 133 aa12.29□□□□□ -0.44
TRAPPC11-204ENST00000505676 NF1P21359 2839 aa12.29□□□□□ -0.44
TRAPPC11-204ENST00000505676 LYRM9A8MSI8 78 aa12.29□□□□□ -0.44
TRAPPC11-204ENST00000505676 GTF2H5Q6ZYL4 71 aa12.29□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE12JA6NER3 117 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE4Q13068 117 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE5Q13069 117 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 Q6ZUT4 128 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 Q6ZVH6 145 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
TRAPPC11-204ENST00000505676 A0A1B0GWB2 263 aa12.27□□□□□ -0.44
TRAPPC11-204ENST00000505676 UBE2D1P51668 147 aa12.27□□□□□ -0.44
TRAPPC11-204ENST00000505676 OR5A1Q8NGJ0 315 aa12.27□□□□□ -0.44
TRAPPC11-204ENST00000505676 TMEM243Q9BU79 118 aa12.27□□□□□ -0.44
TRAPPC11-204ENST00000505676 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.44
TRAPPC11-204ENST00000505676 A0A0J9YY99 117 aa12.27□□□□□ -0.45
TRAPPC11-204ENST00000505676 FHL2Q14192 279 aa12.27□□□□□ -0.45
TRAPPC11-204ENST00000505676 GEMIN7Q9H840 131 aaKnown RBP12.27□□□□□ -0.45
TRAPPC11-204ENST00000505676 IGLV5-45A0A087WSX0 123 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms