RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 F8VRH5 84 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 F8WEM9 126 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-30P01768 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRGV3P03979 118 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 SAA2P0DJI9 122 aaPredicted RBP1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-30-5P0DP03 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF22P17026 224 aaPredicted RBP1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 FCER1GP30273 86 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 ELOF1P60002 83 aaKnown RBP1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 CCL14Q16627 93 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 C17orf58Q2M2W7 97 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 FAM74A4Q5TZK3 123 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 CASC2Q6XLA1 102 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00173Q6ZV60 143 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM263Q8WUH6 116 aaKnown RBP1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 LRRK1Q38SD2 2015 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 MED12LQ86YW9 2145 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 ARHGAP21Q5T5U3 1957 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 NINQ8N4C6 2090 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 DOCK8Q8NF50 2099 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV1-50A0A075B6I6 118 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV3-16A0A075B6K0 115 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV3-12A0A075B6K2 115 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV2D-26A0A0A0MRZ7 120 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRBV6-8A0A0A6YYG3 113 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-43A0A0B4J1X8 118 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV1OR15-9A0A0B4J2B8 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV5-51A0A0C4DH38 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-12A0A0C4DH73 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A0J9YXY3 114 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 CXorf51AA0A1B0GTR3 108 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 HIGD1CA8MV81 97 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 E7EUB6 86 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 NDUFB1O75438 58 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1D-33P01593 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-33P01594 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1D-12P01611 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-11P01762 117 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 COX6B1P14854 86 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 COX7A1P24310 79 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 EDDM3BP56851 147 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 BSPH1Q075Z2 132 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 MIAQ16674 131 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q5VV11 94 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 CXCL17Q6UXB2 119 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 LYZL2Q7Z4W2 148 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q86TA4 180 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZFAND2AQ8N6M9 145 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 SMIM14Q96QK8 99 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 CAMK2N2Q96S95 79 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 AMELXQ99217 191 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 RPP21Q9H633 154 aaKnown RBP1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00574Q9H8X3 128 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 CCL28Q9NRJ3 127 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 CDC42SE2Q9NRR3 84 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14BQ9NUH8 114 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 BAZ2BQ9UIF8 2168 aaKnown RBP1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF831Q5JPB2 1677 aa1.29□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A087WSZ3 146 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A0J9YY99 117 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A1B0GUT8 65 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 JMJD7-PLA2G4BH0Y9G9 81 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 K7ERS5 55 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV1-69P01742 117 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 CHTF8P0CG12 524 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 CCL3P10147 92 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 CCL5P13501 91 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PDE6GP18545 87 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 CD24P25063 80 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 TSPEAR-AS2P59090 65 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PDE6HQ13956 83 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 C9orf129Q5T035 196 aaKnown RBP1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 GDF5OSQ5U4N7 250 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q8IYB0 196 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM61Q8N0U2 210 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 CNEP1R1Q8N9A8 125 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 NPBQ8NG41 125 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 MUC7Q8TAX7 377 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM254Q8TBM7 123 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 IMMP1LQ96LU5 166 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q9BRP9 147 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 UBL5Q9BZL1 73 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 BPESC1Q9GZL8 116 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 C14orf132Q9NPU4 83 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PSENENQ9NZ42 101 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14CQ9P0S9 112 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 C22orf24Q9Y442 160 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 ICOSQ9Y6W8 199 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PLXNA2O75051 1894 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PTPRSQ13332 1948 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 ANAPC1Q9H1A4 1944 aa1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 PHF3Q92576 2039 aaKnown RBP1.28□□□□□ -2.2
HMGB3P17-201ENST00000504195 EML6Q6ZMW3 1958 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 MYO16Q9Y6X6 1858 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-21A0A0B4J1V1 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV1-6A0A0C4DH72 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV7-4-1A0A0J9YVY3 117 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms