RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 C9orf62Q8N4C0 152 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 FER1L6-AS1Q8NA97 138 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 IGLV4-60A0A075B6I1 120 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 ZNF25P17030 456 aaPredicted RBP3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 CTRLP40313 264 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 RPS10P46783 165 aaKnown RBP3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 TEX261Q6UWH6 196 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 C15orf56Q8N910 161 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 FAM213BQ8TBF2 198 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 C7orf33Q8WU49 177 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
LSM3P4-201ENST00000502948 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 UBE2L6O14933 153 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 BCL2L11O43521 198 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 PDE6DO43924 150 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 NTF3P20783 257 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 TAGLN2P37802 199 aaKnown RBP3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 NKX2-5P52952 324 aaPredicted RBP3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 COTL1Q14019 142 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 CLPSL2Q6UWE3 100 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 SPINK6Q6UWN8 80 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 OR2D3Q8NGH3 330 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
LSM3P4-201ENST00000502948 A0A0J9YXV3 536 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 KANTRA0A1W2PQU2 76 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 PHOX2AO14813 284 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 GNG4P50150 75 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 SULT1A2P50226 295 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 COX6A2Q02221 97 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 RGS21Q2M5E4 152 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 CENPWQ5EE01 88 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 EIF5AL1Q6IS14 154 aaKnown RBP3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 LYZL1Q6UWQ5 148 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 LRP2P98164 4655 aa3.83□□□□□ -1.8
LSM3P4-201ENST00000502948 MUC21A0A0G2JKD1 596 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 TRBV6-5A0A0K0K1A5 114 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 MUC21A0A140T8X8 626 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 CCL25O15444 150 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 IFNA1P01562 189 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 MGPP08493 103 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 AMTP48728 403 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 FOXA3P55318 350 aaPredicted RBP3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 CHCHD10Q8WYQ3 142 aaPredicted RBP3.82□□□□□ -1.8
LSM3P4-201ENST00000502948 TRBV20OR9-2A0A075B6H5 130 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 GAGE12HA6NDE8 117 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 ESDP10768 282 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 FOXI1Q12951 378 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 Q6ZRP5 223 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 MRPL52Q86TS9 123 aaKnown RBP3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 STPG4Q8N801 248 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 NUDT10Q8NFP7 164 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 NUDT11Q96G61 164 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 GNG13Q9P2W3 67 aa3.81□□□□□ -1.8
LSM3P4-201ENST00000502948 RAB19A4D1S5 217 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 SDHAF1A6NFY7 115 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 I3L3M4 83 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 APCSP02743 223 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 BCL2P10415 239 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 FGF6P10767 208 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 SSTP61278 116 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 TWIST1Q15672 202 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 MAJINQ3KP22 176 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 CT83Q5H943 113 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 AMMECR1LQ6DCA0 310 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 CD164L2Q6UWJ8 174 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 Q6ZNX1 250 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 FAM231DQ6ZW35 169 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 SMIM15Q7Z3B0 74 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 TPPP3Q9BW30 176 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 RPP21Q9H633 154 aaKnown RBP3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 MED9Q9NWA0 146 aa3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 CSDC2Q9Y534 153 aaKnown RBP3.8□□□□□ -1.8
LSM3P4-201ENST00000502948 A0A096LNI7 61 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 LINC00959A0A1B0GUT2 108 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 A0A1B0GV50 99 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 FAM231BA6NCW3 169 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 F8WDY8 70 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 TMEM250H0YL14 139 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 SMLR1H3BR10 107 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 SMAGPQ0VAQ4 97 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 GTSF1Q8WW33 167 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 TMEM101Q96IK0 257 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 BTF3L4Q96K17 158 aa3.79□□□□□ -1.8
LSM3P4-201ENST00000502948 CDC42SE2Q9NRR3 84 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms