RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 CRPP02741 224 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 C20orf203Q8NBC4 194 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 TMEM243Q9BU79 118 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 V9GYV3 84 aa11.31□□□□□ -0.6
CTNS-207ENST00000495445 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
CTNS-207ENST00000495445 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
CTNS-207ENST00000495445 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
CTNS-207ENST00000495445 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
CTNS-207ENST00000495445 ISOC2Q96AB3 205 aa11.3□□□□□ -0.6
CTNS-207ENST00000495445 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
CTNS-207ENST00000495445 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
CTNS-207ENST00000495445 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
CTNS-207ENST00000495445 COTL1Q14019 142 aa11.29□□□□□ -0.6
CTNS-207ENST00000495445 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
CTNS-207ENST00000495445 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
CTNS-207ENST00000495445 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
CTNS-207ENST00000495445 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
CTNS-207ENST00000495445 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.61
CTNS-207ENST00000495445 REG3AQ06141 175 aa11.27□□□□□ -0.61
CTNS-207ENST00000495445 PEA15Q15121 130 aa11.27□□□□□ -0.61
CTNS-207ENST00000495445 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
CTNS-207ENST00000495445 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
CTNS-207ENST00000495445 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
CTNS-207ENST00000495445 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 GAS8-AS1O95177 125 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 NCR2O95944 276 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 RAB4AP20338 218 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 AMTP48728 403 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 HAMPP81172 84 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 NAT8Q9UHE5 227 aa11.26□□□□□ -0.61
CTNS-207ENST00000495445 TRAV8-4A0A0B4J246 113 aa11.25□□□□□ -0.61
CTNS-207ENST00000495445 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
CTNS-207ENST00000495445 Q5VSD8 79 aa11.25□□□□□ -0.61
CTNS-207ENST00000495445 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
CTNS-207ENST00000495445 H7C423 109 aa11.24□□□□□ -0.61
CTNS-207ENST00000495445 PRSS1P07477 247 aa11.24□□□□□ -0.61
CTNS-207ENST00000495445 POLR2KP53803 58 aaKnown RBP11.24□□□□□ -0.61
CTNS-207ENST00000495445 LINC01620Q4KN68 170 aa11.24□□□□□ -0.61
CTNS-207ENST00000495445 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
CTNS-207ENST00000495445 UBE2L6O14933 153 aa11.23□□□□□ -0.61
CTNS-207ENST00000495445 I3L3M4 83 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 HLA-DQA1P01909 254 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 RIGQ13278 110 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 ADIRFQ15847 76 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 NAT8BQ9UHF3 227 aa11.22□□□□□ -0.61
CTNS-207ENST00000495445 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.61
CTNS-207ENST00000495445 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
CTNS-207ENST00000495445 ESDP10768 282 aa11.21□□□□□ -0.61
CTNS-207ENST00000495445 AMN1Q8IY45 258 aa11.21□□□□□ -0.61
CTNS-207ENST00000495445 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
CTNS-207ENST00000495445 MYCBP2O75592 4640 aa11.21□□□□□ -0.62
CTNS-207ENST00000495445 APCSP02743 223 aa11.2□□□□□ -0.62
CTNS-207ENST00000495445 PMCHP20382 165 aa11.2□□□□□ -0.62
CTNS-207ENST00000495445 RPS10P46783 165 aaKnown RBP11.2□□□□□ -0.62
CTNS-207ENST00000495445 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
CTNS-207ENST00000495445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
CTNS-207ENST00000495445 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
CTNS-207ENST00000495445 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
CTNS-207ENST00000495445 TSHBP01222 138 aa11.19□□□□□ -0.62
CTNS-207ENST00000495445 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
CTNS-207ENST00000495445 C9orf163Q8N9P6 203 aa11.19□□□□□ -0.62
CTNS-207ENST00000495445 FGF6P10767 208 aa11.18□□□□□ -0.62
CTNS-207ENST00000495445 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
CTNS-207ENST00000495445 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
CTNS-207ENST00000495445 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
CTNS-207ENST00000495445 NRACQ8N912 160 aa11.17□□□□□ -0.62
CTNS-207ENST00000495445 A0A1B0GW15 77 aa11.16□□□□□ -0.62
CTNS-207ENST00000495445 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
CTNS-207ENST00000495445 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
CTNS-207ENST00000495445 SMKR1H3BMG3 65 aa11.15□□□□□ -0.62
CTNS-207ENST00000495445 VCYO14598 125 aa11.15□□□□□ -0.62
CTNS-207ENST00000495445 PPP1R17O96001 155 aa11.15□□□□□ -0.62
CTNS-207ENST00000495445 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
CTNS-207ENST00000495445 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
CTNS-207ENST00000495445 CIRBP-AS1Q8TBR5 109 aa11.15□□□□□ -0.62
CTNS-207ENST00000495445 TMEM242Q9NWH2 141 aa11.15□□□□□ -0.62
CTNS-207ENST00000495445 PKHD1L1Q86WI1 4243 aa11.14□□□□□ -0.63
CTNS-207ENST00000495445 HERC1Q15751 4861 aa11.14□□□□□ -0.63
CTNS-207ENST00000495445 SLPIP03973 132 aa11.14□□□□□ -0.63
CTNS-207ENST00000495445 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
CTNS-207ENST00000495445 SDIM1Q6ZPB5 146 aa11.14□□□□□ -0.63
CTNS-207ENST00000495445 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
CTNS-207ENST00000495445 TRBV24-1A0A075B6N3 115 aa11.13□□□□□ -0.63
CTNS-207ENST00000495445 A0A1B0GXF2 115 aa11.13□□□□□ -0.63
CTNS-207ENST00000495445 LINC00862A6NCI5 91 aa11.13□□□□□ -0.63
CTNS-207ENST00000495445 GAGE12HA6NDE8 117 aa11.13□□□□□ -0.63
CTNS-207ENST00000495445 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
CTNS-207ENST00000495445 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
CTNS-207ENST00000495445 CAMPP49913 170 aa11.12□□□□□ -0.63
CTNS-207ENST00000495445 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
CTNS-207ENST00000495445 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
CTNS-207ENST00000495445 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
CTNS-207ENST00000495445 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
CTNS-207ENST00000495445 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
CTNS-207ENST00000495445 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms