RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 AMTP48728 403 aa21.75■■□□□ 1.07
CBX4-203ENST00000494546 TSKUQ8WUA8 353 aa21.75■■□□□ 1.07
CBX4-203ENST00000494546 OSTCQ9NRP0 149 aa21.75■■□□□ 1.07
CBX4-203ENST00000494546 UBE2L6O14933 153 aa21.74■■□□□ 1.07
CBX4-203ENST00000494546 C14orf177Q52M58 125 aa21.74■■□□□ 1.07
CBX4-203ENST00000494546 HIGD1CA8MV81 97 aa21.73■■□□□ 1.07
CBX4-203ENST00000494546 REG3AQ06141 175 aa21.73■■□□□ 1.07
CBX4-203ENST00000494546 C20orf203Q8NBC4 194 aa21.73■■□□□ 1.07
CBX4-203ENST00000494546 TEX261Q6UWH6 196 aa21.72■■□□□ 1.07
CBX4-203ENST00000494546 IGLV4-60A0A075B6I1 120 aa21.71■■□□□ 1.07
CBX4-203ENST00000494546 A0A1B0GUV1 79 aa21.71■■□□□ 1.07
CBX4-203ENST00000494546 USP17L23D6RBM5 183 aa21.71■■□□□ 1.07
CBX4-203ENST00000494546 GFRA4Q9GZZ7 299 aa21.71■■□□□ 1.07
CBX4-203ENST00000494546 A0A1B0GUT8 65 aa21.7■■□□□ 1.06
CBX4-203ENST00000494546 IGLV10-54A0A075B6I4 117 aa21.69■■□□□ 1.06
CBX4-203ENST00000494546 TMEM241Q24JQ0 296 aa21.69■■□□□ 1.06
CBX4-203ENST00000494546 Q6ZSA8 131 aa21.69■■□□□ 1.06
CBX4-203ENST00000494546 FAM229AH3BQW9 127 aa21.68■■□□□ 1.06
CBX4-203ENST00000494546 FAM74A3Q4VXF1 159 aa21.68■■□□□ 1.06
CBX4-203ENST00000494546 FAT1Q14517 4588 aa21.68■■□□□ 1.06
CBX4-203ENST00000494546 FAM231BA6NCW3 169 aa21.67■■□□□ 1.06
CBX4-203ENST00000494546 C9JQL5 133 aa21.67■■□□□ 1.06
CBX4-203ENST00000494546 KRTAP26-1Q6PEX3 210 aa21.67■■□□□ 1.06
CBX4-203ENST00000494546 ISOC2Q96AB3 205 aa21.67■■□□□ 1.06
CBX4-203ENST00000494546 INAFM2P0DMQ5 153 aa21.66■■□□□ 1.06
CBX4-203ENST00000494546 V9GYV3 84 aa21.66■■□□□ 1.06
CBX4-203ENST00000494546 SDHAF1A6NFY7 115 aa21.65■■□□□ 1.06
CBX4-203ENST00000494546 RPL23P62829 140 aaKnown RBP21.65■■□□□ 1.06
CBX4-203ENST00000494546 SRSF3P84103 164 aaKnown RBP21.65■■□□□ 1.06
CBX4-203ENST00000494546 PEA15Q15121 130 aa21.64■■□□□ 1.05
CBX4-203ENST00000494546 ADIRFQ15847 76 aa21.64■■□□□ 1.05
CBX4-203ENST00000494546 TMEM191AQ9H0A3 160 aa21.64■■□□□ 1.05
CBX4-203ENST00000494546 TRAV8-4A0A0B4J246 113 aa21.63■■□□□ 1.05
CBX4-203ENST00000494546 NCR2O95944 276 aa21.63■■□□□ 1.05
CBX4-203ENST00000494546 GAS8-AS1O95177 125 aa21.62■■□□□ 1.05
CBX4-203ENST00000494546 APCSP02743 223 aa21.62■■□□□ 1.05
CBX4-203ENST00000494546 PRSS1P07477 247 aa21.62■■□□□ 1.05
CBX4-203ENST00000494546 NAT8Q9UHE5 227 aa21.62■■□□□ 1.05
CBX4-203ENST00000494546 DNAH8Q96JB1 4490 aa21.62■■□□□ 1.05
CBX4-203ENST00000494546 NUP35Q8NFH5 326 aa21.61■■□□□ 1.05
CBX4-203ENST00000494546 PMCHP20382 165 aa21.6■■□□□ 1.05
CBX4-203ENST00000494546 AMMECR1LQ6DCA0 310 aa21.6■■□□□ 1.05
CBX4-203ENST00000494546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP21.59■■□□□ 1.05
CBX4-203ENST00000494546 TRBV6-5A0A0K0K1A5 114 aa21.59■■□□□ 1.05
CBX4-203ENST00000494546 IGKV2-29A2NJV5 120 aaPredicted RBP21.59■■□□□ 1.05
CBX4-203ENST00000494546 I3L3M4 83 aa21.59■■□□□ 1.05
CBX4-203ENST00000494546 RIGQ13278 110 aa21.59■■□□□ 1.05
CBX4-203ENST00000494546 RNF185Q96GF1 192 aa21.59■■□□□ 1.05
CBX4-203ENST00000494546 ST20Q9HBF5 79 aa21.59■■□□□ 1.05
CBX4-203ENST00000494546 AMN1Q8IY45 258 aa21.58■■□□□ 1.05
CBX4-203ENST00000494546 IGKV3OR2-268A0A0C4DH90 116 aa21.57■■□□□ 1.04
CBX4-203ENST00000494546 RAB4AP20338 218 aa21.57■■□□□ 1.04
CBX4-203ENST00000494546 RNASEKQ6P5S7 137 aaKnown RBP21.57■■□□□ 1.04
CBX4-203ENST00000494546 SCXQ7RTU7 201 aa21.57■■□□□ 1.04
CBX4-203ENST00000494546 SMDT1Q9H4I9 107 aa21.57■■□□□ 1.04
CBX4-203ENST00000494546 NAT8BQ9UHF3 227 aa21.57■■□□□ 1.04
CBX4-203ENST00000494546 RPS10P46783 165 aaKnown RBP21.55■■□□□ 1.04
CBX4-203ENST00000494546 MRAP2Q96G30 205 aa21.55■■□□□ 1.04
CBX4-203ENST00000494546 H7C423 109 aa21.54■■□□□ 1.04
CBX4-203ENST00000494546 FGF6P10767 208 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 DGAT2L7PQ6IED9 249 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 LINC00528Q8N1L1 170 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 CLRN3Q8NCR9 226 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 CHAC1Q9BUX1 264 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 TMEM242Q9NWH2 141 aa21.53■■□□□ 1.04
CBX4-203ENST00000494546 SMKR1H3BMG3 65 aa21.51■■□□□ 1.03
CBX4-203ENST00000494546 TSHBP01222 138 aa21.5■■□□□ 1.03
CBX4-203ENST00000494546 SMIM27A0A1W2PRY6 76 aa21.49■■□□□ 1.03
CBX4-203ENST00000494546 hDV102S1A0JD36 115 aa21.49■■□□□ 1.03
CBX4-203ENST00000494546 GAGE12HA6NDE8 117 aa21.48■■□□□ 1.03
CBX4-203ENST00000494546 POLR2KP53803 58 aaKnown RBP21.48■■□□□ 1.03
CBX4-203ENST00000494546 CIRBP-AS1Q8TBR5 109 aa21.48■■□□□ 1.03
CBX4-203ENST00000494546 VPS13BQ7Z7G8 4022 aa21.47■■□□□ 1.03
CBX4-203ENST00000494546 C9orf163Q8N9P6 203 aa21.47■■□□□ 1.03
CBX4-203ENST00000494546 PLA2G1BP04054 148 aaKnown RBP21.46■■□□□ 1.03
CBX4-203ENST00000494546 ESDP10768 282 aa21.46■■□□□ 1.03
CBX4-203ENST00000494546 ZNF25P17030 456 aaPredicted RBP21.46■■□□□ 1.03
CBX4-203ENST00000494546 BTF3L4Q96K17 158 aa21.46■■□□□ 1.03
CBX4-203ENST00000494546 TRBV27A0A0K0K1C4 114 aa21.45■■□□□ 1.02
CBX4-203ENST00000494546 CAMPP49913 170 aa21.45■■□□□ 1.02
CBX4-203ENST00000494546 TMEM101Q96IK0 257 aa21.45■■□□□ 1.02
CBX4-203ENST00000494546 CHCHD10Q8WYQ3 142 aaPredicted RBP21.44■■□□□ 1.02
CBX4-203ENST00000494546 AP5S1Q9NUS5 200 aa21.43■■□□□ 1.02
CBX4-203ENST00000494546 VCYO14598 125 aa21.42■■□□□ 1.02
CBX4-203ENST00000494546 PPP1R17O96001 155 aa21.42■■□□□ 1.02
CBX4-203ENST00000494546 MRPL51Q4U2R6 128 aaKnown RBP21.42■■□□□ 1.02
CBX4-203ENST00000494546 FAM104BQ5XKR9 115 aa21.42■■□□□ 1.02
CBX4-203ENST00000494546 NRACQ8N912 160 aa21.42■■□□□ 1.02
CBX4-203ENST00000494546 SRRM2Q9UQ35 2752 aaKnown RBP21.42■■□□□ 1.02
CBX4-203ENST00000494546 CNBPP62633 177 aaKnown RBP21.41■■□□□ 1.02
CBX4-203ENST00000494546 OR5A1Q8NGJ0 315 aa21.41■■□□□ 1.02
CBX4-203ENST00000494546 FCER1GP30273 86 aa21.4■■□□□ 1.02
CBX4-203ENST00000494546 SUMO2P61956 95 aaKnown RBP21.4■■□□□ 1.02
CBX4-203ENST00000494546 A0A1B0GW15 77 aa21.39■■□□□ 1.01
CBX4-203ENST00000494546 C7orf77A4D0Y5 90 aa21.39■■□□□ 1.01
CBX4-203ENST00000494546 CFAP161Q6P656 301 aa21.39■■□□□ 1.01
CBX4-203ENST00000494546 MRPL54Q6P161 138 aaKnown RBP21.38■■□□□ 1.01
CBX4-203ENST00000494546 C15orf56Q8N910 161 aa21.38■■□□□ 1.01
CBX4-203ENST00000494546 TRAV16A0A0A6YYK6 109 aaPredicted RBP21.36■■□□□ 1.01
CBX4-203ENST00000494546 SLPIP03973 132 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms