RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 H7C1H1 209 aa8.18□□□□□ -1.1
HSPG2-212ENST00000493940 PRSS1P07477 247 aa8.18□□□□□ -1.1
HSPG2-212ENST00000493940 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
HSPG2-212ENST00000493940 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
HSPG2-212ENST00000493940 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
HSPG2-212ENST00000493940 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
HSPG2-212ENST00000493940 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
HSPG2-212ENST00000493940 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
HSPG2-212ENST00000493940 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
HSPG2-212ENST00000493940 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
HSPG2-212ENST00000493940 CRPP02741 224 aa8.16□□□□□ -1.1
HSPG2-212ENST00000493940 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
HSPG2-212ENST00000493940 REG3AQ06141 175 aa8.16□□□□□ -1.1
HSPG2-212ENST00000493940 MIAQ16674 131 aa8.16□□□□□ -1.1
HSPG2-212ENST00000493940 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
HSPG2-212ENST00000493940 TMEM243Q9BU79 118 aa8.16□□□□□ -1.1
HSPG2-212ENST00000493940 A0A1B0GUV1 79 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 ZNF727A8MUV8 499 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 A8MWL6 223 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 PANO1I0J062 215 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 SLPIP03973 132 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.15□□□□□ -1.1
HSPG2-212ENST00000493940 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 RNF185Q96GF1 192 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 V9GYV3 84 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
HSPG2-212ENST00000493940 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
HSPG2-212ENST00000493940 RPS10P46783 165 aaKnown RBP8.14□□□□□ -1.11
HSPG2-212ENST00000493940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
HSPG2-212ENST00000493940 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
HSPG2-212ENST00000493940 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 NDUFS6O75380 124 aaKnown RBP8.13□□□□□ -1.11
HSPG2-212ENST00000493940 AMTP48728 403 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 COTL1Q14019 142 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 CT83Q5H943 113 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 TSKUQ8WUA8 353 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 OSTCQ9NRP0 149 aa8.13□□□□□ -1.11
HSPG2-212ENST00000493940 SDHAF1A6NFY7 115 aa8.12□□□□□ -1.11
HSPG2-212ENST00000493940 RAB4AP20338 218 aa8.12□□□□□ -1.11
HSPG2-212ENST00000493940 PKIAP61925 76 aa8.12□□□□□ -1.11
HSPG2-212ENST00000493940 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
HSPG2-212ENST00000493940 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
HSPG2-212ENST00000493940 SMKR1H3BMG3 65 aa8.11□□□□□ -1.11
HSPG2-212ENST00000493940 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
HSPG2-212ENST00000493940 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
HSPG2-212ENST00000493940 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
HSPG2-212ENST00000493940 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
HSPG2-212ENST00000493940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
HSPG2-212ENST00000493940 IGKV3OR2-268A0A0C4DH90 116 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 A0A1B0GUT8 65 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 TSHBP01222 138 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 POLR2KP53803 58 aaKnown RBP8.1□□□□□ -1.11
HSPG2-212ENST00000493940 TMEM241Q24JQ0 296 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
HSPG2-212ENST00000493940 NCR2O95944 276 aa8.09□□□□□ -1.11
HSPG2-212ENST00000493940 ESDP10768 282 aa8.09□□□□□ -1.11
HSPG2-212ENST00000493940 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
HSPG2-212ENST00000493940 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
HSPG2-212ENST00000493940 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
HSPG2-212ENST00000493940 TRAV8-4A0A0B4J246 113 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 J3QL48 77 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 UBE2L6O14933 153 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 FGF6P10767 208 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 PMCHP20382 165 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 TMEM242Q9NWH2 141 aa8.08□□□□□ -1.12
HSPG2-212ENST00000493940 I3L3M4 83 aa8.07□□□□□ -1.12
HSPG2-212ENST00000493940 APCSP02743 223 aa8.07□□□□□ -1.12
HSPG2-212ENST00000493940 ADIRFQ15847 76 aa8.07□□□□□ -1.12
HSPG2-212ENST00000493940 NRACQ8N912 160 aa8.07□□□□□ -1.12
HSPG2-212ENST00000493940 SMIM27A0A1W2PRY6 76 aa8.06□□□□□ -1.12
HSPG2-212ENST00000493940 hDV102S1A0JD36 115 aa8.06□□□□□ -1.12
HSPG2-212ENST00000493940 RNASEKQ6P5S7 137 aaKnown RBP8.06□□□□□ -1.12
HSPG2-212ENST00000493940 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
HSPG2-212ENST00000493940 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
HSPG2-212ENST00000493940 NAT8Q9UHE5 227 aa8.06□□□□□ -1.12
HSPG2-212ENST00000493940 TRBV27A0A0K0K1C4 114 aa8.05□□□□□ -1.12
HSPG2-212ENST00000493940 CHTF8P0CG12 524 aa8.05□□□□□ -1.12
HSPG2-212ENST00000493940 HNRNPA3P51991 378 aaKnown RBP8.05□□□□□ -1.12
HSPG2-212ENST00000493940 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
HSPG2-212ENST00000493940 MRPL51Q4U2R6 128 aaKnown RBP8.05□□□□□ -1.12
HSPG2-212ENST00000493940 FAM74A3Q4VXF1 159 aa8.05□□□□□ -1.12
HSPG2-212ENST00000493940 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
HSPG2-212ENST00000493940 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
HSPG2-212ENST00000493940 H7C423 109 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
HSPG2-212ENST00000493940 FOXI1Q12951 378 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 PEA15Q15121 130 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 HIGD2BQ4VC39 106 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 AMMECR1LQ6DCA0 310 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 BORCS7Q96B45 105 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 NAT8BQ9UHF3 227 aa8.04□□□□□ -1.12
HSPG2-212ENST00000493940 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 RIGQ13278 110 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms