RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CLRN3Q8NCR9 226 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 RPS10P5Q9NQ39 176 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 A0A1B0GVY2 172 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 VCYO14598 125 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 APOC3P02656 99 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 APCSP02743 223 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
CCM2-217ENST00000492883 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
CCM2-217ENST00000492883 RHEBQ15382 184 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 NRACQ8N912 160 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 Q8N976 141 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
CCM2-217ENST00000492883 D6R8Y8 96 aa9.37□□□□□ -0.91
CCM2-217ENST00000492883 PPBPP02775 128 aa9.37□□□□□ -0.91
CCM2-217ENST00000492883 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
CCM2-217ENST00000492883 RBX1P62877 108 aa9.37□□□□□ -0.91
CCM2-217ENST00000492883 TM2D2Q9BX73 214 aa9.37□□□□□ -0.91
CCM2-217ENST00000492883 EREGO14944 169 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 CRPP02741 224 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 Q0VG73 95 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 SVBPQ8N300 66 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 RMI2Q96E14 147 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
CCM2-217ENST00000492883 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 SNAPINO95295 136 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 FCER1GP30273 86 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 TMEM136Q6ZRR5 245 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
CCM2-217ENST00000492883 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 TSHBP01222 138 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 COX11Q9Y6N1 276 aa9.34□□□□□ -0.91
CCM2-217ENST00000492883 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
CCM2-217ENST00000492883 A0A087WTM6 91 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
CCM2-217ENST00000492883 H7C423 109 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 PHOX2AO14813 284 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 NPYP01303 97 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
CCM2-217ENST00000492883 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 SLC7A5P1Q8MH63 180 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
CCM2-217ENST00000492883 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
CCM2-217ENST00000492883 ESDP10768 282 aa9.32□□□□□ -0.92
CCM2-217ENST00000492883 SPATA12Q7Z6I5 190 aa9.32□□□□□ -0.92
CCM2-217ENST00000492883 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
CCM2-217ENST00000492883 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
CCM2-217ENST00000492883 FGF6P10767 208 aa9.31□□□□□ -0.92
CCM2-217ENST00000492883 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
CCM2-217ENST00000492883 REG3AQ06141 175 aa9.31□□□□□ -0.92
CCM2-217ENST00000492883 MIAQ16674 131 aa9.31□□□□□ -0.92
CCM2-217ENST00000492883 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
CCM2-217ENST00000492883 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
CCM2-217ENST00000492883 TCAPO15273 167 aa9.3□□□□□ -0.92
CCM2-217ENST00000492883 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
CCM2-217ENST00000492883 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
CCM2-217ENST00000492883 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
CCM2-217ENST00000492883 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 LOC389332A0A1B0GUA5 103 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 COX19Q49B96 90 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
CCM2-217ENST00000492883 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
CCM2-217ENST00000492883 RAB5AP20339 215 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 KRTAP10-2P60368 255 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 SMAGPQ0VAQ4 97 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 TMEM18Q96B42 140 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CCM2-217ENST00000492883 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
CCM2-217ENST00000492883 TRAV8-4A0A0B4J246 113 aa9.27□□□□□ -0.93
CCM2-217ENST00000492883 LECT2O14960 151 aa9.27□□□□□ -0.93
CCM2-217ENST00000492883 TGIF2-C20orf24A0A0A6YYL0 155 aa9.26□□□□□ -0.93
CCM2-217ENST00000492883 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
CCM2-217ENST00000492883 Q8N814 137 aa9.26□□□□□ -0.93
CCM2-217ENST00000492883 MT-ND6P03923 174 aa9.25□□□□□ -0.93
CCM2-217ENST00000492883 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCM2-217ENST00000492883 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
CCM2-217ENST00000492883 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
CCM2-217ENST00000492883 EPPK1P58107 5090 aaKnown RBP9.24□□□□□ -0.93
CCM2-217ENST00000492883 WFDC2Q14508 124 aa9.24□□□□□ -0.93
CCM2-217ENST00000492883 ZNF664Q8N3J9 261 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms