RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TMEM14BQ9NUH8 114 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 DEPDC5O75140 1603 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGKV1D-42A0A075B6H8 117 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGKV1D-37A0A075B6S9 117 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGKV1OR2-108A0A075B7D4 117 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGHV1-3A0A0C4DH29 117 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 ZNF815PA8K554 130 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 TMEM14DPA8MWL7 114 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 ERC2-IT1O76042 136 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 P0C880 135 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 MGST1P10620 155 aaKnown RBP2.8□□□□□ -1.96
BRCA1-220ENST00000492859 CD24P25063 80 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 ATP5EP2Q5VTU8 51 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 IGFL4Q6B9Z1 124 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-220ENST00000492859 ICOSQ9Y6W8 199 aa2.8□□□□□ -1.96
BRCA1-220ENST00000492859 A8MUU9 505 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 FSHBP01225 129 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 INSP01308 110 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 IGLV2-11P01706 119 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 IGKV3-11P04433 115 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 COX6CP09669 75 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 SNRPGP62308 76 aaKnown RBP2.79□□□□□ -1.96
BRCA1-220ENST00000492859 C10orf128Q5T292 105 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 TMEM190Q8WZ59 177 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 CDC42SE2Q9NRR3 84 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 KIAA0100Q14667 2235 aaKnown RBP2.79□□□□□ -1.96
BRCA1-220ENST00000492859 LRP6O75581 1613 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 ESPL1Q14674 2120 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 MYO7BQ6PIF6 2116 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 ZGRF1Q86YA3 2104 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 BCORQ6W2J9 1755 aa2.79□□□□□ -1.96
BRCA1-220ENST00000492859 CXorf51AA0A1B0GTR3 108 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 PMS2P5A8MQ11 134 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 Q6ZR03 302 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 LYPD6Q86Y78 171 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 CYYR1Q96J86 154 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 DOT1LQ8TEK3 1739 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 TOGARAM1Q9Y4F4 1720 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 IGLV3-16A0A075B6K0 115 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 H7C2G1 150 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 IGLV2-14P01704 120 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 SLPIP03973 132 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 MIR22HGQ0VDD5 57 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 C14orf132Q9NPU4 83 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 TIMM9Q9Y5J7 89 aa2.78□□□□□ -1.96
BRCA1-220ENST00000492859 KIF26BQ2KJY2 2108 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 ZNF831Q5JPB2 1677 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 ARHGAP32A7KAX9 2087 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 NRAPQ86VF7 1730 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-220ENST00000492859 A0A087WSZ3 146 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 TRAV1-2A0A0B4J238 106 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 LOC101927531A0A1B0GV80 90 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 PSCAO43653 123 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 BAALC-AS2P0C853 105 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 HMGA1P17096 107 aaKnown RBP2.77□□□□□ -1.97
BRCA1-220ENST00000492859 LYZP61626 148 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 MIR7-3HGQ8N6C7 128 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 TET1Q8NFU7 2136 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 SLIT1O75093 1534 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 COL4A1P02462 1669 aa2.77□□□□□ -1.97
BRCA1-220ENST00000492859 DDX60Q8IY21 1712 aaKnown RBP2.76□□□□□ -1.97
BRCA1-220ENST00000492859 A0A087WVE0 104 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 TRBV6-8A0A0A6YYG3 113 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 TRAV12-3A0A0B4J271 114 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 H7C423 109 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 PROP1O75360 226 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 TMEM105Q8N8V8 129 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 LINC01560Q8TB33 94 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 PI4KAP42356 2102 aa2.76□□□□□ -1.97
BRCA1-220ENST00000492859 TCF20Q9UGU0 1960 aaKnown RBP2.75□□□□□ -1.97
BRCA1-220ENST00000492859 K7EMI3 77 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 RTL8CO15255 209 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 ARMS2P0C7Q2 107 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 EIF4EBP1Q13541 118 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-220ENST00000492859 Q8TAT8 98 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 IMMP1LQ96LU5 166 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 FREM3P0C091 2139 aa2.75□□□□□ -1.97
BRCA1-220ENST00000492859 TRAV23DV6A0A075B6W5 121 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 IGHV3OR16-8A0A075B7F1 116 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 TRBV7-4A0A0J9YYF1 115 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 C11orf86A6NJI1 115 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 H3BPC8 53 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 PANO1I0J062 215 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 IFI6P09912 130 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 SMIM29Q86T20 159 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 NDUFA4L2Q9NRX3 87 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 TNRC6BQ9UPQ9 1833 aaKnown RBP2.74□□□□□ -1.97
BRCA1-220ENST00000492859 IGKV3D-11A0A0A0MRZ8 115 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 HMGN4O00479 90 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 LINC01565O15544 149 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 FCER1GP30273 86 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms