RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ORMDL2Q53FV1 153 aa15.34■□□□□ 0.05
PSPC1-204ENST00000492741 PMCHL1Q16048 86 aa15.33■□□□□ 0.04
PSPC1-204ENST00000492741 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
PSPC1-204ENST00000492741 LINC01546A6NGU7 62 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 BTF3P20290 206 aaKnown RBP15.31■□□□□ 0.04
PSPC1-204ENST00000492741 FAM19A2Q8N3H0 131 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 C15orf53Q8NAA6 179 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 GTSF1LQ9H1H1 148 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 STAB2Q8WWQ8 2551 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 TMEM97Q5BJF2 176 aa15.31■□□□□ 0.04
PSPC1-204ENST00000492741 AMTP48728 403 aa15.3■□□□□ 0.04
PSPC1-204ENST00000492741 CEMP1Q6PRD7 247 aaPredicted RBP15.3■□□□□ 0.04
PSPC1-204ENST00000492741 NUPR2A6NF83 97 aa15.29■□□□□ 0.04
PSPC1-204ENST00000492741 C5orf52A6NGY3 159 aa15.29■□□□□ 0.04
PSPC1-204ENST00000492741 ESDP10768 282 aa15.29■□□□□ 0.04
PSPC1-204ENST00000492741 S100A2P29034 98 aa15.29■□□□□ 0.04
PSPC1-204ENST00000492741 NTM-AS1Q6ZSK4 140 aa15.29■□□□□ 0.04
PSPC1-204ENST00000492741 TRBV25-1A0A075B6N4 114 aa15.28■□□□□ 0.04
PSPC1-204ENST00000492741 IGHV1-24A0A0C4DH33 117 aa15.28■□□□□ 0.04
PSPC1-204ENST00000492741 G0S2P27469 103 aa15.28■□□□□ 0.04
PSPC1-204ENST00000492741 TRBV6-8A0A0A6YYG3 113 aa15.27■□□□□ 0.04
PSPC1-204ENST00000492741 KLK5Q9Y337 293 aaPredicted RBP15.27■□□□□ 0.04
PSPC1-204ENST00000492741 HBDP02042 147 aa15.26■□□□□ 0.03
PSPC1-204ENST00000492741 HIST3H2BBQ8N257 126 aa15.26■□□□□ 0.03
PSPC1-204ENST00000492741 LYPD5Q6UWN5 251 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 C2orf66Q6UXQ4 117 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 TMEM18Q96B42 140 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 TMEM243Q9BU79 118 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 CHCHD7Q9BUK0 85 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 CYSLTR1Q9Y271 337 aa15.25■□□□□ 0.03
PSPC1-204ENST00000492741 UBE2L6O14933 153 aa15.24■□□□□ 0.03
PSPC1-204ENST00000492741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-204ENST00000492741 IGKV2-29A2NJV5 120 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-204ENST00000492741 FABP4P15090 132 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 RPL39P62891 51 aaKnown RBP15.23■□□□□ 0.03
PSPC1-204ENST00000492741 C20orf203Q8NBC4 194 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 WWC2-AS2Q96NR7 200 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 CHCHD5Q9BSY4 110 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 A0A096LNJ9 63 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 ZFAND6Q6FIF0 208 aa15.23■□□□□ 0.03
PSPC1-204ENST00000492741 TOMM6Q96B49 74 aa15.22■□□□□ 0.03
PSPC1-204ENST00000492741 LEPROTL1O95214 131 aa15.21■□□□□ 0.03
PSPC1-204ENST00000492741 ESRGQ1W209 222 aa15.21■□□□□ 0.03
PSPC1-204ENST00000492741 LELP1Q5T871 98 aa15.21■□□□□ 0.03
PSPC1-204ENST00000492741 MUC7Q8TAX7 377 aa15.21■□□□□ 0.03
PSPC1-204ENST00000492741 SCGB3A1Q96QR1 104 aa15.2■□□□□ 0.02
PSPC1-204ENST00000492741 LINC01549A6NIU2 74 aa15.19■□□□□ 0.02
PSPC1-204ENST00000492741 TMEM262E9PQX1 116 aa15.19■□□□□ 0.02
PSPC1-204ENST00000492741 TIRAPP58753 221 aa15.19■□□□□ 0.02
PSPC1-204ENST00000492741 GAGE6Q13070 117 aa15.19■□□□□ 0.02
PSPC1-204ENST00000492741 TRAV8-6A0A0B4J262 113 aa15.18■□□□□ 0.02
PSPC1-204ENST00000492741 CCL18P55774 89 aa15.18■□□□□ 0.02
PSPC1-204ENST00000492741 HIST1H2BLQ99880 126 aa15.18■□□□□ 0.02
PSPC1-204ENST00000492741 HSPB8Q9UJY1 196 aa15.18■□□□□ 0.02
PSPC1-204ENST00000492741 AMMECR1LQ6DCA0 310 aa15.17■□□□□ 0.02
PSPC1-204ENST00000492741 APLNQ9ULZ1 77 aa15.17■□□□□ 0.02
PSPC1-204ENST00000492741 SMAGPQ0VAQ4 97 aa15.17■□□□□ 0.02
PSPC1-204ENST00000492741 DGAT2L7PQ6IED9 249 aa15.17■□□□□ 0.02
PSPC1-204ENST00000492741 TGP01266 2768 aa15.16■□□□□ 0.02
PSPC1-204ENST00000492741 H7C423 109 aa15.16■□□□□ 0.02
PSPC1-204ENST00000492741 FGF6P10767 208 aa15.16■□□□□ 0.02
PSPC1-204ENST00000492741 PACRGQ96M98 296 aaPredicted RBP15.16■□□□□ 0.02
PSPC1-204ENST00000492741 IFITM10A6NMD0 228 aa15.15■□□□□ 0.02
PSPC1-204ENST00000492741 TCTAP57738 103 aa15.15■□□□□ 0.02
PSPC1-204ENST00000492741 ERASQ7Z444 233 aa15.15■□□□□ 0.02
PSPC1-204ENST00000492741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.14■□□□□ 0.01
PSPC1-204ENST00000492741 ATP5LO75964 103 aa15.14■□□□□ 0.01
PSPC1-204ENST00000492741 LINC00173Q6ZV60 143 aa15.14■□□□□ 0.01
PSPC1-204ENST00000492741 UBE2D4Q9Y2X8 147 aa15.14■□□□□ 0.01
PSPC1-204ENST00000492741 TMEM101Q96IK0 257 aa15.14■□□□□ 0.01
PSPC1-204ENST00000492741 SPANXA1Q9NS26 97 aa15.14■□□□□ 0.01
PSPC1-204ENST00000492741 IFI27L1Q96BM0 104 aa15.13■□□□□ 0.01
PSPC1-204ENST00000492741 A0A087WX48 190 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 IGIPA6NJ69 53 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 TMEM141Q96I45 108 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 TIMM17AQ99595 171 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 LINC00588Q9Y4M8 146 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 DNAH7Q8WXX0 4024 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 PKIAP61925 76 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 Q6ZN92 141 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 OR5A1Q8NGJ0 315 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 PYGO1Q9Y3Y4 419 aa15.12■□□□□ 0.01
PSPC1-204ENST00000492741 H0Y8G0 127 aa15.11■□□□□ 0.01
PSPC1-204ENST00000492741 MRPL52Q86TS9 123 aaKnown RBP15.11■□□□□ 0.01
PSPC1-204ENST00000492741 OPRPNQ99935 248 aaPredicted RBP15.11■□□□□ 0.01
PSPC1-204ENST00000492741 TIMM21Q9BVV7 248 aa15.11■□□□□ 0.01
PSPC1-204ENST00000492741 MAP1LC3CQ9BXW4 147 aa15.11■□□□□ 0.01
PSPC1-204ENST00000492741 PRSS1P07477 247 aa15.1■□□□□ 0.01
PSPC1-204ENST00000492741 ZNF25P17030 456 aaPredicted RBP15.1■□□□□ 0.01
PSPC1-204ENST00000492741 WFDC10BQ8IUB3 73 aa15.1■□□□□ 0.01
PSPC1-204ENST00000492741 UBE2DNLQ8IWF7 75 aa15.1■□□□□ 0.01
PSPC1-204ENST00000492741 OR10D4PQ8NGN7 298 aa15.1■□□□□ 0.01
PSPC1-204ENST00000492741 KRTDAPP60985 99 aa15.09■□□□□ 0.01
PSPC1-204ENST00000492741 MPV17L2Q567V2 206 aa15.09■□□□□ 0.01
PSPC1-204ENST00000492741 MRPS16Q9Y3D3 137 aaKnown RBP15.09■□□□□ 0.01
PSPC1-204ENST00000492741 PAPPA-AS1Q5QFB9 102 aa15.09■□□□□ 0.01
PSPC1-204ENST00000492741 Q8N976 141 aa15.09■□□□□ 0.01
PSPC1-204ENST00000492741 CSDC2Q9Y534 153 aaKnown RBP15.09■□□□□ 0.01
PSPC1-204ENST00000492741 RBX1P62877 108 aa15.08■□□□□ 0
PSPC1-204ENST00000492741 IGLV4-3A0A075B6K6 122 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms