RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IGHV3-33P01772 117 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 SRP19P09132 144 aaKnown RBP2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 IGHV3-30-5P0DP03 117 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 IFI30P13284 250 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 DEFA1P59665 94 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 DHFR2Q86XF0 187 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 RNASE11Q8TAA1 199 aaKnown RBP2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 ACOT12Q8WYK0 555 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 PPP3R2Q96LZ3 170 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 ERMAPQ96PL5 475 aaPredicted RBP2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 GID8Q9NWU2 228 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 FUT9Q9Y231 359 aa2.08□□□□□ -2.08
SSX2IP-208ENST00000490476 TRBV20OR9-2A0A075B6H5 130 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 TRAV14DV4A0A0A6YYC5 116 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 LEPROTO15243 131 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 CYB5AP00167 134 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 DHFRP00374 187 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 PPBPP02775 128 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 TCRBP04435 133 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 HIST1H1BP16401 226 aaKnown RBP2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 RPL28P46779 137 aaKnown RBP2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 TMEM258P61165 79 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 PSME3P61289 254 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 HACD4Q5VWC8 232 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 TMEM42Q69YG0 159 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 OR10J5Q8NHC4 309 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 NEK7Q8TDX7 302 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 DCANP1Q8TF63 244 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 FAM107BQ9H098 131 aa2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.07□□□□□ -2.08
SSX2IP-208ENST00000490476 TMSB15BA0A087X1C1 80 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 LOC107986453A0A1B0GWG9 222 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 EFCAB10A6NFE3 127 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 DEGS1O15121 323 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 ORC5O43913 435 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 RPL19P84098 196 aaKnown RBP2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 SPA17Q15506 151 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 NDUFA5Q16718 116 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 RPL39P5Q59GN2 51 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 OR4D11Q8NGI4 311 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 DIRC1Q969H9 104 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 NIPSNAP1Q9BPW8 284 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 EFCAB1Q9HAE3 211 aa2.06□□□□□ -2.08
SSX2IP-208ENST00000490476 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 ZNF682O95780 498 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 SRIP30626 198 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 RANP62826 216 aaKnown RBP2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 SLC38A11Q08AI6 406 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 ZNF846Q147U1 533 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 LYZL1Q6UWQ5 148 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 S100A7AQ86SG5 101 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 ANKRD29Q8N6D5 301 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 MAFIPQ8WZ33 124 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 LZICQ8WZA0 190 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 GINS3Q9BRX5 216 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 TIMM21Q9BVV7 248 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 WDR61Q9GZS3 305 aaKnown RBP2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 TPT1P8Q9HAU6 139 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 XAGE1AQ9HD64 81 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 ARL2BPQ9Y2Y0 163 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 DNAJC15Q9Y5T4 150 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 IER3IP1Q9Y5U9 82 aa2.05□□□□□ -2.08
SSX2IP-208ENST00000490476 TRAV7A0A075B6U4 112 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 TMEM30CPA0ZSE6 113 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 A6NIN4 97 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 APOA2P02652 100 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 S100A3P33764 101 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 DEFB1P60022 68 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 PSG9Q00887 426 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 SMCO1Q147U7 214 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 KLK9Q2XQG4 91 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 MORN2Q502X0 79 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 TRIQKQ629K1 86 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 Q6ZS49 121 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 Q6ZTI0 123 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 CLVS1Q8IUQ0 354 aaPredicted RBP2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 VSTM2AQ8TAG5 236 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 MAGOHBQ96A72 148 aaKnown RBP2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 BORCS8Q96FH0 119 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 GPX7Q96SL4 187 aaPredicted RBP2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 IL36BQ9NZH7 164 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
SSX2IP-208ENST00000490476 IGHV3-64A0A075B6Q5 118 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 H7C2G1 150 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 CDC42EP2O14613 210 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 SULT1A3P0DMM9 295 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 SULT1A4P0DMN0 295 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 RPL5P46777 297 aaKnown RBP2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 CDK6Q00534 326 aa2.03□□□□□ -2.08
SSX2IP-208ENST00000490476 RTL8BQ17RB0 113 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms