RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
SEC13-218ENST00000490283 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
SEC13-218ENST00000490283 REG3AQ06141 175 aa11.45□□□□□ -0.58
SEC13-218ENST00000490283 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
SEC13-218ENST00000490283 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
SEC13-218ENST00000490283 USP17L23D6RBM5 183 aa11.44□□□□□ -0.58
SEC13-218ENST00000490283 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
SEC13-218ENST00000490283 FAM74A3Q4VXF1 159 aa11.44□□□□□ -0.58
SEC13-218ENST00000490283 OSTCQ9NRP0 149 aa11.44□□□□□ -0.58
SEC13-218ENST00000490283 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
SEC13-218ENST00000490283 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 HIGD1CA8MV81 97 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 INAFM2P0DMQ5 153 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 DEFB104AQ8WTQ1 72 aa11.43□□□□□ -0.58
SEC13-218ENST00000490283 NCR2O95944 276 aa11.42□□□□□ -0.58
SEC13-218ENST00000490283 TMEM241Q24JQ0 296 aa11.42□□□□□ -0.58
SEC13-218ENST00000490283 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
SEC13-218ENST00000490283 Q6ZSA8 131 aa11.42□□□□□ -0.58
SEC13-218ENST00000490283 C20orf203Q8NBC4 194 aa11.42□□□□□ -0.58
SEC13-218ENST00000490283 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
SEC13-218ENST00000490283 IGLV10-54A0A075B6I4 117 aa11.41□□□□□ -0.58
SEC13-218ENST00000490283 APCSP02743 223 aa11.41□□□□□ -0.58
SEC13-218ENST00000490283 PEA15Q15121 130 aa11.41□□□□□ -0.58
SEC13-218ENST00000490283 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
SEC13-218ENST00000490283 IGLV4-60A0A075B6I1 120 aa11.4□□□□□ -0.58
SEC13-218ENST00000490283 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
SEC13-218ENST00000490283 PMCHP20382 165 aa11.39□□□□□ -0.59
SEC13-218ENST00000490283 RIGQ13278 110 aa11.39□□□□□ -0.59
SEC13-218ENST00000490283 ADIRFQ15847 76 aa11.39□□□□□ -0.59
SEC13-218ENST00000490283 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
SEC13-218ENST00000490283 NAT8Q9UHE5 227 aa11.39□□□□□ -0.59
SEC13-218ENST00000490283 H7C423 109 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 I3L3M4 83 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 ISOC2Q96AB3 205 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 ST20Q9HBF5 79 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 V9GYV3 84 aa11.38□□□□□ -0.59
SEC13-218ENST00000490283 TRBV6-5A0A0K0K1A5 114 aa11.37□□□□□ -0.59
SEC13-218ENST00000490283 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
SEC13-218ENST00000490283 PRSS1P07477 247 aa11.37□□□□□ -0.59
SEC13-218ENST00000490283 RPL23P62829 140 aaKnown RBP11.37□□□□□ -0.59
SEC13-218ENST00000490283 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
SEC13-218ENST00000490283 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
SEC13-218ENST00000490283 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
SEC13-218ENST00000490283 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
SEC13-218ENST00000490283 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
SEC13-218ENST00000490283 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
SEC13-218ENST00000490283 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.35□□□□□ -0.59
SEC13-218ENST00000490283 IGKV3OR2-268A0A0C4DH90 116 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 IGKV2-29A2NJV5 120 aaPredicted RBP11.35□□□□□ -0.59
SEC13-218ENST00000490283 LINC00528Q8N1L1 170 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 NUP35Q8NFH5 326 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 AP5S1Q9NUS5 200 aa11.35□□□□□ -0.59
SEC13-218ENST00000490283 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
SEC13-218ENST00000490283 PPP1R17O96001 155 aa11.34□□□□□ -0.59
SEC13-218ENST00000490283 FGF6P10767 208 aa11.34□□□□□ -0.59
SEC13-218ENST00000490283 ZNF25P17030 456 aaPredicted RBP11.34□□□□□ -0.59
SEC13-218ENST00000490283 RAB4AP20338 218 aa11.34□□□□□ -0.59
SEC13-218ENST00000490283 AMN1Q8IY45 258 aa11.34□□□□□ -0.59
SEC13-218ENST00000490283 RNF185Q96GF1 192 aa11.33□□□□□ -0.6
SEC13-218ENST00000490283 C9JQL5 133 aa11.32□□□□□ -0.6
SEC13-218ENST00000490283 SRSF3P84103 164 aaKnown RBP11.32□□□□□ -0.6
SEC13-218ENST00000490283 CFAP161Q6P656 301 aa11.32□□□□□ -0.6
SEC13-218ENST00000490283 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
SEC13-218ENST00000490283 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
SEC13-218ENST00000490283 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
SEC13-218ENST00000490283 A0A1B0GW15 77 aa11.31□□□□□ -0.6
SEC13-218ENST00000490283 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
SEC13-218ENST00000490283 OR5A1Q8NGJ0 315 aa11.31□□□□□ -0.6
SEC13-218ENST00000490283 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
SEC13-218ENST00000490283 TSHBP01222 138 aa11.3□□□□□ -0.6
SEC13-218ENST00000490283 FCER1GP30273 86 aa11.3□□□□□ -0.6
SEC13-218ENST00000490283 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
SEC13-218ENST00000490283 TRBV27A0A0K0K1C4 114 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 C7orf77A4D0Y5 90 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 VCYO14598 125 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 S100A8P05109 93 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
SEC13-218ENST00000490283 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
SEC13-218ENST00000490283 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
SEC13-218ENST00000490283 SMAGPQ0VAQ4 97 aa11.29□□□□□ -0.6
SEC13-218ENST00000490283 FAT1Q14517 4588 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 VPS13BQ7Z7G8 4022 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 PPP1R2P9O14990 202 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 ESDP10768 282 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 CAMPP49913 170 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 RAB14P61106 215 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 CHCHD10Q8WYQ3 142 aaPredicted RBP11.28□□□□□ -0.6
SEC13-218ENST00000490283 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 DNAH8Q96JB1 4490 aa11.28□□□□□ -0.6
SEC13-218ENST00000490283 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
SEC13-218ENST00000490283 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms