RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SDHAF1A6NFY7 115 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF815PA8K554 130 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 IQCF6A8MYZ5 107 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 CCDC179H3BU77 68 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 K7EN84 100 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM256-PLSCR3K7ERE1 68 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 M0R135 149 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 MRPS12O15235 138 aaKnown RBP1.34□□□□□ -2.19
HMGN1-218ENST00000490032 LEPROTO15243 131 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 CCL16O15467 120 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 FGF6P10767 208 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 IAPPP10997 89 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF138P52744 262 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 HIST1H4AP62805 103 aaKnown RBP1.34□□□□□ -2.19
HMGN1-218ENST00000490032 DEFB121Q5J5C9 76 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 CLLU1OSQ5K130 101 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 LINC01590Q5TEZ4 76 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 FAM27BQ5VT28 67 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 C5orf38Q86SI9 138 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 NDUFA11Q86Y39 141 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 SLC25A45Q8N413 288 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 Q8N8P6 123 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 EEF1AKMT3Q96AZ1 226 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 METTL26Q96S19 204 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 TTTY10Q9BZA0 68 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 DPH3P1Q9H4G8 78 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 RETNQ9HD89 108 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 HILPDAQ9Y5L2 63 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 SETXQ7Z333 2677 aaKnown RBP1.34□□□□□ -2.2
HMGN1-218ENST00000490032 CHD9Q3L8U1 2897 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF292O60281 2723 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 MED12LQ86YW9 2145 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 TET1Q8NFU7 2136 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 PLXNB3Q9ULL4 1909 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 EYSQ5T1H1 3165 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 ASH1LQ9NR48 2969 aaKnown RBP1.34□□□□□ -2.2
HMGN1-218ENST00000490032 PCDH15Q96QU1 1955 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 MYO7AQ13402 2215 aa1.34□□□□□ -2.2
HMGN1-218ENST00000490032 PTPN13Q12923 2485 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 MPDZO75970 2070 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 CFAP54Q96N23 3096 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 HELZ2Q9BYK8 2649 aaKnown RBP1.33□□□□□ -2.2
HMGN1-218ENST00000490032 CACNA1DQ01668 2161 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV7A0A075B6U4 112 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 IGLV1-36A0A0B4J1U3 117 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV13-2A0A0B4J235 113 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV4A0A0B4J268 109 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 TRBV7-6A0A0J9YX20 115 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 FAM236DA0A1B0GTK5 79 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 F6UB75 175 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 H3BP45 60 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 J3QQQ9 107 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 SH2D1AO60880 128 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 ERC2-IT1O76042 136 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 NDUFA3O95167 84 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 CT62P0C5K7 136 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 BAALC-AS2P0C853 105 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 FAM236CP0DP71 79 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 CD52P31358 61 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 UBE2D3P61077 147 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 UBE2D2P62837 147 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 UBE2BP63146 152 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 FXYD3Q14802 87 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 RHOHQ15669 191 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF726P1Q15940 193 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 C4orf26Q17RF5 130 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 KRTAP21-3Q3LHN1 58 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 DEFB134Q4QY38 66 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 MRPL51Q4U2R6 128 aaKnown RBP1.33□□□□□ -2.2
HMGN1-218ENST00000490032 SPANXN1Q5VSR9 72 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 HCP5Q6MZN7 132 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF818PQ6ZRF7 136 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 Q6ZSR3 168 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 Q6ZT83 130 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 MARCH3Q86UD3 253 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 MDP1Q86V88 176 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 PRR15Q8IV56 129 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 C1orf158Q8N1D5 194 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 SLC25A29Q8N8R3 303 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 SPANXA2-OT1Q8N9U9 137 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 TMEM75Q8N9X5 138 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 C18orf15Q96N68 181 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 SLC50A1Q9BRV3 221 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 EMC6Q9BV81 110 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 C11orf1Q9H5F2 150 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 DAZ1Q9NQZ3 744 aaKnown RBP1.33□□□□□ -2.2
HMGN1-218ENST00000490032 MRPL35Q9NZE8 188 aaKnown RBP1.33□□□□□ -2.2
HMGN1-218ENST00000490032 THADAQ6YHU6 1953 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 KIAA1549Q9HCM3 1950 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 IGF2RP11717 2491 aa1.33□□□□□ -2.2
HMGN1-218ENST00000490032 PTPRSQ13332 1948 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF462Q96JM2 2506 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 USP9XQ93008 2570 aaPredicted RBP1.32□□□□□ -2.2
HMGN1-218ENST00000490032 CEP295Q9C0D2 2601 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 ATG2BQ96BY7 2078 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TMSB15BA0A087X1C1 80 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 TRBV27A0A0K0K1C4 114 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 SPAARA0A1B0GVQ0 90 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 A0A1B0GXF2 115 aa1.32□□□□□ -2.2
HMGN1-218ENST00000490032 RBAKDNA6NC62 111 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms