RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GFRA4Q9GZZ7 299 aa9.14□□□□□ -0.95
VTI1A-206ENST00000489142 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
VTI1A-206ENST00000489142 REG3AQ06141 175 aa9.13□□□□□ -0.95
VTI1A-206ENST00000489142 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
VTI1A-206ENST00000489142 FLG2Q5D862 2391 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-206ENST00000489142 UBE2L6O14933 153 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 PRSS1P07477 247 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 AMTP48728 403 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 COTL1Q14019 142 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 FAM210AQ96ND0 272 aa9.12□□□□□ -0.95
VTI1A-206ENST00000489142 ZNF727A8MUV8 499 aa9.11□□□□□ -0.95
VTI1A-206ENST00000489142 A8MWL6 223 aa9.11□□□□□ -0.95
VTI1A-206ENST00000489142 SRP19P09132 144 aaKnown RBP9.11□□□□□ -0.95
VTI1A-206ENST00000489142 C14orf177Q52M58 125 aa9.11□□□□□ -0.95
VTI1A-206ENST00000489142 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
VTI1A-206ENST00000489142 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
VTI1A-206ENST00000489142 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
VTI1A-206ENST00000489142 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
VTI1A-206ENST00000489142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-206ENST00000489142 A0A1B0GUV1 79 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-206ENST00000489142 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 CT83Q5H943 113 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 CHAC1Q9BUX1 264 aa9.08□□□□□ -0.96
VTI1A-206ENST00000489142 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
VTI1A-206ENST00000489142 C9JQL5 133 aa9.07□□□□□ -0.96
VTI1A-206ENST00000489142 SRSF3P84103 164 aaKnown RBP9.07□□□□□ -0.96
VTI1A-206ENST00000489142 TSKUQ8WUA8 353 aa9.07□□□□□ -0.96
VTI1A-206ENST00000489142 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
VTI1A-206ENST00000489142 A0A1B0GUT8 65 aa9.06□□□□□ -0.96
VTI1A-206ENST00000489142 APCSP02743 223 aa9.06□□□□□ -0.96
VTI1A-206ENST00000489142 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
VTI1A-206ENST00000489142 AMMECR1LQ6DCA0 310 aa9.06□□□□□ -0.96
VTI1A-206ENST00000489142 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
VTI1A-206ENST00000489142 OSTCQ9NRP0 149 aa9.06□□□□□ -0.96
VTI1A-206ENST00000489142 V9GYV3 84 aa9.06□□□□□ -0.96
VTI1A-206ENST00000489142 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-206ENST00000489142 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
VTI1A-206ENST00000489142 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
VTI1A-206ENST00000489142 ISOC2Q96AB3 205 aa9.05□□□□□ -0.96
VTI1A-206ENST00000489142 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
VTI1A-206ENST00000489142 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
VTI1A-206ENST00000489142 NCR2O95944 276 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 PMCHP20382 165 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
VTI1A-206ENST00000489142 ADIRFQ15847 76 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 TMEM241Q24JQ0 296 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 TEX261Q6UWH6 196 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 AMN1Q8IY45 258 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 TMEM242Q9NWH2 141 aa9.04□□□□□ -0.96
VTI1A-206ENST00000489142 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 PANO1I0J062 215 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 I3L3M4 83 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 FGF6P10767 208 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 RAB4AP20338 218 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 NUP35Q8NFH5 326 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 TMEM191AQ9H0A3 160 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 ST20Q9HBF5 79 aa9.03□□□□□ -0.96
VTI1A-206ENST00000489142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-206ENST00000489142 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
VTI1A-206ENST00000489142 TSHBP01222 138 aa9.02□□□□□ -0.97
VTI1A-206ENST00000489142 SLPIP03973 132 aa9.02□□□□□ -0.97
VTI1A-206ENST00000489142 CLRN3Q8NCR9 226 aa9.02□□□□□ -0.97
VTI1A-206ENST00000489142 HERC1Q15751 4861 aa9.01□□□□□ -0.97
VTI1A-206ENST00000489142 C15orf56Q8N910 161 aa9.01□□□□□ -0.97
VTI1A-206ENST00000489142 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-206ENST00000489142 NAT8Q9UHE5 227 aa9.01□□□□□ -0.97
VTI1A-206ENST00000489142 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
VTI1A-206ENST00000489142 RIGQ13278 110 aa9□□□□□ -0.97
VTI1A-206ENST00000489142 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
VTI1A-206ENST00000489142 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
VTI1A-206ENST00000489142 MRAP2Q96G30 205 aa9□□□□□ -0.97
VTI1A-206ENST00000489142 NAT8BQ9UHF3 227 aa9□□□□□ -0.97
VTI1A-206ENST00000489142 H7C423 109 aa8.99□□□□□ -0.97
VTI1A-206ENST00000489142 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
VTI1A-206ENST00000489142 PEA15Q15121 130 aa8.99□□□□□ -0.97
VTI1A-206ENST00000489142 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
VTI1A-206ENST00000489142 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
VTI1A-206ENST00000489142 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
VTI1A-206ENST00000489142 ESDP10768 282 aa8.98□□□□□ -0.97
VTI1A-206ENST00000489142 CAMPP49913 170 aa8.98□□□□□ -0.97
VTI1A-206ENST00000489142 POLR2KP53803 58 aaKnown RBP8.98□□□□□ -0.97
VTI1A-206ENST00000489142 NRACQ8N912 160 aa8.98□□□□□ -0.97
VTI1A-206ENST00000489142 SMIM27A0A1W2PRY6 76 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 J3QL48 77 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 XCL1P47992 114 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 FOXI1Q12951 378 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 MRPL51Q4U2R6 128 aaKnown RBP8.97□□□□□ -0.97
VTI1A-206ENST00000489142 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 TMEM101Q96IK0 257 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms