RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 C20orf203Q8NBC4 194 aa16.34■□□□□ 0.21
HMGN1-217ENST00000489072 FRZBQ92765 325 aa16.34■□□□□ 0.21
HMGN1-217ENST00000489072 RPL39LQ96EH5 51 aaKnown RBP16.34■□□□□ 0.21
HMGN1-217ENST00000489072 SMIM15Q7Z3B0 74 aa16.33■□□□□ 0.2
HMGN1-217ENST00000489072 HLA-DQA1P01909 254 aa16.32■□□□□ 0.2
HMGN1-217ENST00000489072 COTL1Q14019 142 aa16.32■□□□□ 0.2
HMGN1-217ENST00000489072 OSTCQ9NRP0 149 aa16.32■□□□□ 0.2
HMGN1-217ENST00000489072 IGLV4-60A0A075B6I1 120 aa16.31■□□□□ 0.2
HMGN1-217ENST00000489072 TSKUQ8WUA8 353 aa16.31■□□□□ 0.2
HMGN1-217ENST00000489072 GFRA4Q9GZZ7 299 aa16.31■□□□□ 0.2
HMGN1-217ENST00000489072 A0A1B0GUV1 79 aa16.3■□□□□ 0.2
HMGN1-217ENST00000489072 C9JQL5 133 aa16.3■□□□□ 0.2
HMGN1-217ENST00000489072 USP17L23D6RBM5 183 aa16.3■□□□□ 0.2
HMGN1-217ENST00000489072 AMTP48728 403 aa16.3■□□□□ 0.2
HMGN1-217ENST00000489072 REG3AQ06141 175 aa16.3■□□□□ 0.2
HMGN1-217ENST00000489072 HIGD1CA8MV81 97 aa16.29■□□□□ 0.2
HMGN1-217ENST00000489072 C14orf177Q52M58 125 aa16.29■□□□□ 0.2
HMGN1-217ENST00000489072 TEX261Q6UWH6 196 aa16.28■□□□□ 0.2
HMGN1-217ENST00000489072 V9GYV3 84 aa16.28■□□□□ 0.2
HMGN1-217ENST00000489072 IGLV10-54A0A075B6I4 117 aa16.27■□□□□ 0.2
HMGN1-217ENST00000489072 A0A1B0GUT8 65 aa16.27■□□□□ 0.2
HMGN1-217ENST00000489072 INAFM2P0DMQ5 153 aa16.27■□□□□ 0.2
HMGN1-217ENST00000489072 SRSF3P84103 164 aaKnown RBP16.27■□□□□ 0.2
HMGN1-217ENST00000489072 BORCS7Q96B45 105 aa16.27■□□□□ 0.2
HMGN1-217ENST00000489072 FAM231BA6NCW3 169 aa16.26■□□□□ 0.19
HMGN1-217ENST00000489072 UBE2L6O14933 153 aa16.26■□□□□ 0.19
HMGN1-217ENST00000489072 GAS8-AS1O95177 125 aa16.26■□□□□ 0.19
HMGN1-217ENST00000489072 TMEM241Q24JQ0 296 aa16.26■□□□□ 0.19
HMGN1-217ENST00000489072 ISOC2Q96AB3 205 aa16.26■□□□□ 0.19
HMGN1-217ENST00000489072 FLG2Q5D862 2391 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-217ENST00000489072 SDHAF1A6NFY7 115 aa16.25■□□□□ 0.19
HMGN1-217ENST00000489072 FAM229AH3BQW9 127 aa16.25■□□□□ 0.19
HMGN1-217ENST00000489072 PRSS1P07477 247 aa16.25■□□□□ 0.19
HMGN1-217ENST00000489072 RPL23P62829 140 aaKnown RBP16.25■□□□□ 0.19
HMGN1-217ENST00000489072 FAM74A3Q4VXF1 159 aa16.25■□□□□ 0.19
HMGN1-217ENST00000489072 TMEM191AQ9H0A3 160 aa16.24■□□□□ 0.19
HMGN1-217ENST00000489072 RNF185Q96GF1 192 aa16.23■□□□□ 0.19
HMGN1-217ENST00000489072 TRAV8-4A0A0B4J246 113 aa16.22■□□□□ 0.19
HMGN1-217ENST00000489072 TRBV6-5A0A0K0K1A5 114 aa16.22■□□□□ 0.19
HMGN1-217ENST00000489072 NCR2O95944 276 aa16.22■□□□□ 0.19
HMGN1-217ENST00000489072 MYCBP2O75592 4640 aa16.21■□□□□ 0.19
HMGN1-217ENST00000489072 ADIRFQ15847 76 aa16.21■□□□□ 0.19
HMGN1-217ENST00000489072 SCXQ7RTU7 201 aa16.21■□□□□ 0.19
HMGN1-217ENST00000489072 NUP35Q8NFH5 326 aa16.21■□□□□ 0.19
HMGN1-217ENST00000489072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-217ENST00000489072 IGKV2-29A2NJV5 120 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-217ENST00000489072 APCSP02743 223 aa16.2■□□□□ 0.18
HMGN1-217ENST00000489072 RAB4AP20338 218 aa16.2■□□□□ 0.18
HMGN1-217ENST00000489072 PEA15Q15121 130 aa16.2■□□□□ 0.18
HMGN1-217ENST00000489072 NAT8Q9UHE5 227 aa16.2■□□□□ 0.18
HMGN1-217ENST00000489072 AMN1Q8IY45 258 aa16.19■□□□□ 0.18
HMGN1-217ENST00000489072 I3L3M4 83 aa16.18■□□□□ 0.18
HMGN1-217ENST00000489072 RPS10P46783 165 aaKnown RBP16.18■□□□□ 0.18
HMGN1-217ENST00000489072 CHAC1Q9BUX1 264 aa16.18■□□□□ 0.18
HMGN1-217ENST00000489072 PMCHP20382 165 aa16.17■□□□□ 0.18
HMGN1-217ENST00000489072 RIGQ13278 110 aa16.17■□□□□ 0.18
HMGN1-217ENST00000489072 LINC00528Q8N1L1 170 aa16.17■□□□□ 0.18
HMGN1-217ENST00000489072 ST20Q9HBF5 79 aa16.17■□□□□ 0.18
HMGN1-217ENST00000489072 DMBT1Q9UGM3 2413 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-217ENST00000489072 TSHBP01222 138 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 AMMECR1LQ6DCA0 310 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 DGAT2L7PQ6IED9 249 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 MRAP2Q96G30 205 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 SMDT1Q9H4I9 107 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 NAT8BQ9UHF3 227 aa16.16■□□□□ 0.18
HMGN1-217ENST00000489072 H7C423 109 aa16.15■□□□□ 0.18
HMGN1-217ENST00000489072 FGF6P10767 208 aa16.15■□□□□ 0.18
HMGN1-217ENST00000489072 POLR2KP53803 58 aaKnown RBP16.15■□□□□ 0.18
HMGN1-217ENST00000489072 RNASEKQ6P5S7 137 aaKnown RBP16.15■□□□□ 0.18
HMGN1-217ENST00000489072 CIRBP-AS1Q8TBR5 109 aa16.15■□□□□ 0.18
HMGN1-217ENST00000489072 TMEM242Q9NWH2 141 aa16.15■□□□□ 0.18
HMGN1-217ENST00000489072 IGKV3OR2-268A0A0C4DH90 116 aa16.14■□□□□ 0.17
HMGN1-217ENST00000489072 SMKR1H3BMG3 65 aa16.14■□□□□ 0.17
HMGN1-217ENST00000489072 C9orf163Q8N9P6 203 aa16.14■□□□□ 0.17
HMGN1-217ENST00000489072 CLRN3Q8NCR9 226 aa16.14■□□□□ 0.17
HMGN1-217ENST00000489072 SMIM27A0A1W2PRY6 76 aa16.13■□□□□ 0.17
HMGN1-217ENST00000489072 ESDP10768 282 aa16.13■□□□□ 0.17
HMGN1-217ENST00000489072 HERC1Q15751 4861 aa16.12■□□□□ 0.17
HMGN1-217ENST00000489072 TRBV27A0A0K0K1C4 114 aa16.11■□□□□ 0.17
HMGN1-217ENST00000489072 hDV102S1A0JD36 115 aa16.11■□□□□ 0.17
HMGN1-217ENST00000489072 GAGE12HA6NDE8 117 aa16.11■□□□□ 0.17
HMGN1-217ENST00000489072 NRACQ8N912 160 aa16.1■□□□□ 0.17
HMGN1-217ENST00000489072 PLA2G1BP04054 148 aaKnown RBP16.09■□□□□ 0.17
HMGN1-217ENST00000489072 ZNF25P17030 456 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-217ENST00000489072 CNBPP62633 177 aaKnown RBP16.09■□□□□ 0.17
HMGN1-217ENST00000489072 SLPIP03973 132 aa16.08■□□□□ 0.16
HMGN1-217ENST00000489072 FAM104BQ5XKR9 115 aa16.08■□□□□ 0.16
HMGN1-217ENST00000489072 C15orf56Q8N910 161 aa16.08■□□□□ 0.16
HMGN1-217ENST00000489072 CHCHD10Q8WYQ3 142 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-217ENST00000489072 CAMPP49913 170 aa16.07■□□□□ 0.16
HMGN1-217ENST00000489072 MRPL51Q4U2R6 128 aaKnown RBP16.07■□□□□ 0.16
HMGN1-217ENST00000489072 SDIM1Q6ZPB5 146 aa16.07■□□□□ 0.16
HMGN1-217ENST00000489072 OR5A1Q8NGJ0 315 aa16.06■□□□□ 0.16
HMGN1-217ENST00000489072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-217ENST00000489072 PANO1I0J062 215 aa16.05■□□□□ 0.16
HMGN1-217ENST00000489072 TMEM101Q96IK0 257 aa16.05■□□□□ 0.16
HMGN1-217ENST00000489072 BTF3L4Q96K17 158 aa16.05■□□□□ 0.16
HMGN1-217ENST00000489072 VCYO14598 125 aa16.04■□□□□ 0.16
HMGN1-217ENST00000489072 SUMO2P61956 95 aaKnown RBP16.04■□□□□ 0.16
HMGN1-217ENST00000489072 MRPL52Q86TS9 123 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms