RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 HNRNPA3P51991 378 aaKnown RBP16.63■□□□□ 0.25
RNF220-216ENST00000488865 CIRBPQ14011 172 aaKnown RBP16.63■□□□□ 0.25
RNF220-216ENST00000488865 C9orf62Q8N4C0 152 aa16.63■□□□□ 0.25
RNF220-216ENST00000488865 TRBV20OR9-2A0A075B6H5 130 aa16.62■□□□□ 0.25
RNF220-216ENST00000488865 GFRA4Q9GZZ7 299 aa16.62■□□□□ 0.25
RNF220-216ENST00000488865 AP5S1Q9NUS5 200 aa16.62■□□□□ 0.25
RNF220-216ENST00000488865 MED9Q9NWA0 146 aa16.62■□□□□ 0.25
RNF220-216ENST00000488865 UBE2L6O14933 153 aa16.61■□□□□ 0.25
RNF220-216ENST00000488865 CTRLP40313 264 aa16.61■□□□□ 0.25
RNF220-216ENST00000488865 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.6■□□□□ 0.25
RNF220-216ENST00000488865 COTL1Q14019 142 aa16.6■□□□□ 0.25
RNF220-216ENST00000488865 IGHV3-64A0A075B6Q5 118 aa16.59■□□□□ 0.25
RNF220-216ENST00000488865 BCL2P10415 239 aa16.59■□□□□ 0.25
RNF220-216ENST00000488865 CNFNQ9BYD5 112 aa16.59■□□□□ 0.25
RNF220-216ENST00000488865 AMTP48728 403 aa16.58■□□□□ 0.24
RNF220-216ENST00000488865 NUDT10Q8NFP7 164 aa16.58■□□□□ 0.24
RNF220-216ENST00000488865 NUDT11Q96G61 164 aa16.58■□□□□ 0.24
RNF220-216ENST00000488865 SLPIP03973 132 aa16.57■□□□□ 0.24
RNF220-216ENST00000488865 RNF185Q96GF1 192 aa16.57■□□□□ 0.24
RNF220-216ENST00000488865 TWIST1Q15672 202 aa16.56■□□□□ 0.24
RNF220-216ENST00000488865 PLA2G2DQ9UNK4 145 aa16.56■□□□□ 0.24
RNF220-216ENST00000488865 TAGLN2P37802 199 aaKnown RBP16.55■□□□□ 0.24
RNF220-216ENST00000488865 DPH3Q96FX2 82 aa16.54■□□□□ 0.24
RNF220-216ENST00000488865 CFAP161Q6P656 301 aa16.53■□□□□ 0.24
RNF220-216ENST00000488865 Q6ZRU5 148 aa16.53■□□□□ 0.24
RNF220-216ENST00000488865 GATD1Q8NB37 220 aa16.53■□□□□ 0.24
RNF220-216ENST00000488865 RPP21Q9H633 154 aaKnown RBP16.53■□□□□ 0.24
RNF220-216ENST00000488865 A0A087WYN8 130 aa16.52■□□□□ 0.24
RNF220-216ENST00000488865 SPACA4Q8TDM5 124 aa16.52■□□□□ 0.24
RNF220-216ENST00000488865 C15orf56Q8N910 161 aa16.51■□□□□ 0.23
RNF220-216ENST00000488865 RNASE7Q9H1E1 156 aaKnown RBP16.51■□□□□ 0.23
RNF220-216ENST00000488865 GAGE12HA6NDE8 117 aa16.5■□□□□ 0.23
RNF220-216ENST00000488865 NCR2O95944 276 aa16.5■□□□□ 0.23
RNF220-216ENST00000488865 CHTF8P0CG12 524 aa16.5■□□□□ 0.23
RNF220-216ENST00000488865 SLC51BQ86UW2 128 aa16.5■□□□□ 0.23
RNF220-216ENST00000488865 TRAV26-2A0A0B4J265 109 aa16.49■□□□□ 0.23
RNF220-216ENST00000488865 OCC1Q8TAD7 63 aa16.49■□□□□ 0.23
RNF220-216ENST00000488865 H7C423 109 aa16.48■□□□□ 0.23
RNF220-216ENST00000488865 K7EN84 100 aa16.48■□□□□ 0.23
RNF220-216ENST00000488865 SMIM15Q7Z3B0 74 aa16.48■□□□□ 0.23
RNF220-216ENST00000488865 TCTE3Q8IZS6 198 aa16.48■□□□□ 0.23
RNF220-216ENST00000488865 PLAC8Q9NZF1 115 aa16.48■□□□□ 0.23
RNF220-216ENST00000488865 MT1HL1P0DM35 61 aa16.47■□□□□ 0.23
RNF220-216ENST00000488865 AMMECR1LQ6DCA0 310 aa16.47■□□□□ 0.23
RNF220-216ENST00000488865 TEX261Q6UWH6 196 aa16.47■□□□□ 0.23
RNF220-216ENST00000488865 Q6ZNX1 250 aa16.47■□□□□ 0.23
RNF220-216ENST00000488865 IGKV3OR2-268A0A0C4DH90 116 aa16.46■□□□□ 0.23
RNF220-216ENST00000488865 RPS10P46783 165 aaKnown RBP16.46■□□□□ 0.23
RNF220-216ENST00000488865 GTSF1Q8WW33 167 aa16.46■□□□□ 0.23
RNF220-216ENST00000488865 RPL39LQ96EH5 51 aaKnown RBP16.46■□□□□ 0.23
RNF220-216ENST00000488865 CHCHD10Q8WYQ3 142 aaPredicted RBP16.45■□□□□ 0.22
RNF220-216ENST00000488865 APCSP02743 223 aa16.44■□□□□ 0.22
RNF220-216ENST00000488865 RNASEKQ6P5S7 137 aaKnown RBP16.44■□□□□ 0.22
RNF220-216ENST00000488865 COX6A2Q02221 97 aa16.43■□□□□ 0.22
RNF220-216ENST00000488865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.42■□□□□ 0.22
RNF220-216ENST00000488865 IGKV2-29A2NJV5 120 aaPredicted RBP16.42■□□□□ 0.22
RNF220-216ENST00000488865 SDHAF1A6NFY7 115 aa16.42■□□□□ 0.22
RNF220-216ENST00000488865 NDUFS6O75380 124 aaKnown RBP16.42■□□□□ 0.22
RNF220-216ENST00000488865 FGF6P10767 208 aa16.42■□□□□ 0.22
RNF220-216ENST00000488865 FOXA3P55318 350 aaPredicted RBP16.42■□□□□ 0.22
RNF220-216ENST00000488865 HIGD2BQ4VC39 106 aa16.42■□□□□ 0.22
RNF220-216ENST00000488865 C7orf33Q8WU49 177 aa16.42■□□□□ 0.22
RNF220-216ENST00000488865 ZNF25P17030 456 aaPredicted RBP16.41■□□□□ 0.22
RNF220-216ENST00000488865 GVQW2A0A096LPI5 108 aaPredicted RBP16.4■□□□□ 0.22
RNF220-216ENST00000488865 GATCO43716 136 aaKnown RBP16.4■□□□□ 0.22
RNF220-216ENST00000488865 FAM231DQ6ZW35 169 aa16.4■□□□□ 0.22
RNF220-216ENST00000488865 A8MWL6 223 aa16.39■□□□□ 0.21
RNF220-216ENST00000488865 TMEM250H0YL14 139 aa16.39■□□□□ 0.21
RNF220-216ENST00000488865 PHOX2AO14813 284 aa16.39■□□□□ 0.21
RNF220-216ENST00000488865 PRSS3P2Q8NHM4 247 aa16.39■□□□□ 0.21
RNF220-216ENST00000488865 UBR4Q5T4S7 5183 aa16.39■□□□□ 0.21
RNF220-216ENST00000488865 TRBV6-5A0A0K0K1A5 114 aa16.38■□□□□ 0.21
RNF220-216ENST00000488865 I3L3M4 83 aa16.38■□□□□ 0.21
RNF220-216ENST00000488865 OR5A1Q8NGJ0 315 aa16.38■□□□□ 0.21
RNF220-216ENST00000488865 PMCHP20382 165 aa16.37■□□□□ 0.21
RNF220-216ENST00000488865 FOXI1Q12951 378 aa16.37■□□□□ 0.21
RNF220-216ENST00000488865 MAJINQ3KP22 176 aa16.37■□□□□ 0.21
RNF220-216ENST00000488865 FAM210AQ96ND0 272 aa16.37■□□□□ 0.21
RNF220-216ENST00000488865 FAM231BA6NCW3 169 aa16.36■□□□□ 0.21
RNF220-216ENST00000488865 CT83Q5H943 113 aa16.36■□□□□ 0.21
RNF220-216ENST00000488865 BTF3L4Q96K17 158 aa16.36■□□□□ 0.21
RNF220-216ENST00000488865 IGKV2-24A0A0C4DH68 120 aa16.35■□□□□ 0.21
RNF220-216ENST00000488865 TMEM101Q96IK0 257 aa16.35■□□□□ 0.21
RNF220-216ENST00000488865 ESDP10768 282 aa16.34■□□□□ 0.21
RNF220-216ENST00000488865 BLOC1S1P78537 153 aa16.34■□□□□ 0.21
RNF220-216ENST00000488865 STPG4Q8N801 248 aa16.33■□□□□ 0.2
RNF220-216ENST00000488865 LINC00959A0A1B0GUT2 108 aa16.32■□□□□ 0.2
RNF220-216ENST00000488865 XCL1P47992 114 aa16.32■□□□□ 0.2
RNF220-216ENST00000488865 BORCS7Q96B45 105 aa16.32■□□□□ 0.2
RNF220-216ENST00000488865 ST20Q9HBF5 79 aa16.32■□□□□ 0.2
RNF220-216ENST00000488865 PKIGQ9Y2B9 76 aa16.32■□□□□ 0.2
RNF220-216ENST00000488865 IGHV1-58A0A0C4DH39 117 aa16.31■□□□□ 0.2
RNF220-216ENST00000488865 TSHBP01222 138 aa16.31■□□□□ 0.2
RNF220-216ENST00000488865 LYPD6BQ8NI32 183 aa16.31■□□□□ 0.2
RNF220-216ENST00000488865 MRAP2Q96G30 205 aa16.31■□□□□ 0.2
RNF220-216ENST00000488865 LINC00474Q9P2X8 69 aa16.31■□□□□ 0.2
RNF220-216ENST00000488865 A0A096LNI7 61 aa16.3■□□□□ 0.2
RNF220-216ENST00000488865 CCL25O15444 150 aa16.3■□□□□ 0.2
RNF220-216ENST00000488865 TMEM191AQ9H0A3 160 aa16.3■□□□□ 0.2
RNF220-216ENST00000488865 A0A1B0GUT8 65 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms