RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
MCF2L-229ENST00000488765 Q9HAA7 133 aa12.05□□□□□ -0.48
MCF2L-229ENST00000488765 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
MCF2L-229ENST00000488765 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
MCF2L-229ENST00000488765 WIPF1O43516 503 aa12.05□□□□□ -0.48
MCF2L-229ENST00000488765 ZNF462Q96JM2 2506 aa12.05□□□□□ -0.48
MCF2L-229ENST00000488765 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
MCF2L-229ENST00000488765 H3BT86 120 aa12.04□□□□□ -0.48
MCF2L-229ENST00000488765 LST1O00453 97 aa12.04□□□□□ -0.48
MCF2L-229ENST00000488765 C10orf105Q8TEF2 133 aa12.04□□□□□ -0.48
MCF2L-229ENST00000488765 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
MCF2L-229ENST00000488765 VCYO14598 125 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 A0A1B0GX51 115 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 COX7CP15954 63 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 NOTCH2Q04721 2471 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 KLK9Q9UKQ9 250 aa12.03□□□□□ -0.48
MCF2L-229ENST00000488765 TRACP01848 142 aa12.02□□□□□ -0.48
MCF2L-229ENST00000488765 LRRC75A-AS1Q8N1F1 130 aa12.02□□□□□ -0.48
MCF2L-229ENST00000488765 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.48
MCF2L-229ENST00000488765 DPM3Q9P2X0 92 aa12.02□□□□□ -0.48
MCF2L-229ENST00000488765 POLR2KP53803 58 aaKnown RBP12.01□□□□□ -0.49
MCF2L-229ENST00000488765 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 OVOL1O14753 267 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 Q8N2B8 174 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 MYO9AB2RTY4 2548 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 LITAFQ99732 161 aa12.01□□□□□ -0.49
MCF2L-229ENST00000488765 TMEM141Q96I45 108 aa12□□□□□ -0.49
MCF2L-229ENST00000488765 IGSF10Q6WRI0 2623 aa12□□□□□ -0.49
MCF2L-229ENST00000488765 ZANQ9Y493 2812 aa12□□□□□ -0.49
MCF2L-229ENST00000488765 LINC00315P59091 139 aa12□□□□□ -0.49
MCF2L-229ENST00000488765 DPH3Q96FX2 82 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
MCF2L-229ENST00000488765 LINC00643Q86TS7 51 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 FAM19A4Q96LR4 140 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 TRAV12-2A0A075B6T6 113 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 TIRAPP58753 221 aa11.99□□□□□ -0.49
MCF2L-229ENST00000488765 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 TIMM17AQ99595 171 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 IGHV3OR16-10A0A075B7F0 116 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 TMEM219Q86XT9 240 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 IGHV1-69DA0A0B4J2H0 117 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 CD28P10747 220 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 TMEM61Q8N0U2 210 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 Q9UF83 564 aa11.98□□□□□ -0.49
MCF2L-229ENST00000488765 IGHV7-81A0A0B4J1V7 117 aa11.97□□□□□ -0.49
MCF2L-229ENST00000488765 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
MCF2L-229ENST00000488765 ADORA2A-AS1P86434 159 aa11.97□□□□□ -0.49
MCF2L-229ENST00000488765 PEMTQ9UBM1 199 aa11.97□□□□□ -0.49
MCF2L-229ENST00000488765 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
MCF2L-229ENST00000488765 ATP6V0E1O15342 81 aa11.96□□□□□ -0.49
MCF2L-229ENST00000488765 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
MCF2L-229ENST00000488765 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.5
MCF2L-229ENST00000488765 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.5
MCF2L-229ENST00000488765 TRBV12-3P01733 135 aa11.96□□□□□ -0.5
MCF2L-229ENST00000488765 IGHV3-11P01762 117 aa11.95□□□□□ -0.5
MCF2L-229ENST00000488765 PROK1P58294 105 aa11.95□□□□□ -0.5
MCF2L-229ENST00000488765 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
MCF2L-229ENST00000488765 CITED2Q99967 270 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-229ENST00000488765 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
MCF2L-229ENST00000488765 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
MCF2L-229ENST00000488765 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
MCF2L-229ENST00000488765 PRM2P04554 102 aa11.94□□□□□ -0.5
MCF2L-229ENST00000488765 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
MCF2L-229ENST00000488765 FAM218AQ96MZ4 157 aa11.93□□□□□ -0.5
MCF2L-229ENST00000488765 KNCNA6PVL3 124 aa11.93□□□□□ -0.5
MCF2L-229ENST00000488765 EDN2P20800 178 aa11.93□□□□□ -0.5
MCF2L-229ENST00000488765 MIAQ16674 131 aa11.93□□□□□ -0.5
MCF2L-229ENST00000488765 C14orf132Q9NPU4 83 aa11.93□□□□□ -0.5
MCF2L-229ENST00000488765 A0A1W2PPR1 153 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 IMUPQ9GZP8 106 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 PPP1R17O96001 155 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 KAAG1Q9UBP8 84 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
MCF2L-229ENST00000488765 DEFB121Q5J5C9 76 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 C1orf43Q9BWL3 253 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 TINCRA0A1B0GVN0 87 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 CRYGAP11844 174 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 NPBQ8NG41 125 aa11.91□□□□□ -0.5
MCF2L-229ENST00000488765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-229ENST00000488765 IGKV2-29A2NJV5 120 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-229ENST00000488765 RNF5Q99942 180 aa11.9□□□□□ -0.5
MCF2L-229ENST00000488765 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.51
MCF2L-229ENST00000488765 GNLYP22749 145 aa11.9□□□□□ -0.51
MCF2L-229ENST00000488765 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.51
MCF2L-229ENST00000488765 SYNJ2BPP57105 145 aa11.89□□□□□ -0.51
MCF2L-229ENST00000488765 HILS1P60008 231 aa11.89□□□□□ -0.51
MCF2L-229ENST00000488765 IGHV4OR15-8A0A075B7B6 117 aa11.89□□□□□ -0.51
MCF2L-229ENST00000488765 A0A087WW49 117 aa11.89□□□□□ -0.51
MCF2L-229ENST00000488765 Q5XG85 94 aa11.89□□□□□ -0.51
MCF2L-229ENST00000488765 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
MCF2L-229ENST00000488765 ACYP1P07311 99 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms