RNA–Protein interactions for RNA: ENST00000488466.5

ITGB5-209, Transcript of integrin subunit beta 5, humanhuman

TSL 5

Gene ITGB5, Length 971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-209ENST00000488466 WDR73Q6P4I2 378 aa10.54□□□□□ -0.72
ITGB5-209ENST00000488466 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
ITGB5-209ENST00000488466 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
ITGB5-209ENST00000488466 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
ITGB5-209ENST00000488466 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
ITGB5-209ENST00000488466 RPL23P62829 140 aaKnown RBP10.53□□□□□ -0.72
ITGB5-209ENST00000488466 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
ITGB5-209ENST00000488466 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
ITGB5-209ENST00000488466 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
ITGB5-209ENST00000488466 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
ITGB5-209ENST00000488466 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
ITGB5-209ENST00000488466 MYCBP2O75592 4640 aa10.52□□□□□ -0.72
ITGB5-209ENST00000488466 ADIRFQ15847 76 aa10.52□□□□□ -0.73
ITGB5-209ENST00000488466 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
ITGB5-209ENST00000488466 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
ITGB5-209ENST00000488466 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
ITGB5-209ENST00000488466 HERC1Q15751 4861 aa10.52□□□□□ -0.73
ITGB5-209ENST00000488466 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
ITGB5-209ENST00000488466 REG3AQ06141 175 aa10.51□□□□□ -0.73
ITGB5-209ENST00000488466 TWIST1Q15672 202 aa10.51□□□□□ -0.73
ITGB5-209ENST00000488466 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
ITGB5-209ENST00000488466 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
ITGB5-209ENST00000488466 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
ITGB5-209ENST00000488466 PRSS1P07477 247 aa10.5□□□□□ -0.73
ITGB5-209ENST00000488466 COMMD7Q86VX2 200 aa10.49□□□□□ -0.73
ITGB5-209ENST00000488466 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
ITGB5-209ENST00000488466 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
ITGB5-209ENST00000488466 GTSF1Q8WW33 167 aa10.49□□□□□ -0.73
ITGB5-209ENST00000488466 AMTP48728 403 aa10.48□□□□□ -0.73
ITGB5-209ENST00000488466 COTL1Q14019 142 aa10.48□□□□□ -0.73
ITGB5-209ENST00000488466 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
ITGB5-209ENST00000488466 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
ITGB5-209ENST00000488466 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 UBE2L6O14933 153 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 SMIM15Q7Z3B0 74 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 V9GYV3 84 aa10.47□□□□□ -0.73
ITGB5-209ENST00000488466 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 LINC00862A6NCI5 91 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 CT83Q5H943 113 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 UQCC3Q6UW78 93 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 CLRN3Q8NCR9 226 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 GFRA4Q9GZZ7 299 aa10.46□□□□□ -0.73
ITGB5-209ENST00000488466 A8MWL6 223 aa10.45□□□□□ -0.74
ITGB5-209ENST00000488466 ADCYAP1P18509 176 aa10.45□□□□□ -0.74
ITGB5-209ENST00000488466 C9orf163Q8N9P6 203 aa10.45□□□□□ -0.74
ITGB5-209ENST00000488466 KRTAP10-4P60372 401 aaPredicted RBP10.44□□□□□ -0.74
ITGB5-209ENST00000488466 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
ITGB5-209ENST00000488466 TMEM218A2RU14 115 aa10.43□□□□□ -0.74
ITGB5-209ENST00000488466 J3QL48 77 aa10.43□□□□□ -0.74
ITGB5-209ENST00000488466 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
ITGB5-209ENST00000488466 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
ITGB5-209ENST00000488466 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
ITGB5-209ENST00000488466 NCR2O95944 276 aa10.42□□□□□ -0.74
ITGB5-209ENST00000488466 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
ITGB5-209ENST00000488466 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
ITGB5-209ENST00000488466 KRTAP29-1A8MX34 341 aaPredicted RBP10.41□□□□□ -0.74
ITGB5-209ENST00000488466 F8W036 122 aa10.41□□□□□ -0.74
ITGB5-209ENST00000488466 BORCS7Q96B45 105 aa10.41□□□□□ -0.74
ITGB5-209ENST00000488466 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
ITGB5-209ENST00000488466 APCSP02743 223 aa10.4□□□□□ -0.74
ITGB5-209ENST00000488466 PNRC1Q12796 327 aaPredicted RBP10.4□□□□□ -0.74
ITGB5-209ENST00000488466 AMMECR1LQ6DCA0 310 aa10.4□□□□□ -0.74
ITGB5-209ENST00000488466 NUP35Q8NFH5 326 aa10.4□□□□□ -0.74
ITGB5-209ENST00000488466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
ITGB5-209ENST00000488466 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
ITGB5-209ENST00000488466 FAM231BA6NCW3 169 aa10.39□□□□□ -0.75
ITGB5-209ENST00000488466 H7C423 109 aa10.39□□□□□ -0.75
ITGB5-209ENST00000488466 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
ITGB5-209ENST00000488466 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
ITGB5-209ENST00000488466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-209ENST00000488466 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-209ENST00000488466 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
ITGB5-209ENST00000488466 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-209ENST00000488466 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
ITGB5-209ENST00000488466 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 I3L3M4 83 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 FGF6P10767 208 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 RPL37AP61513 92 aaKnown RBP10.37□□□□□ -0.75
ITGB5-209ENST00000488466 RNASEKQ6P5S7 137 aaKnown RBP10.37□□□□□ -0.75
ITGB5-209ENST00000488466 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
ITGB5-209ENST00000488466 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
ITGB5-209ENST00000488466 PANO1I0J062 215 aa10.36□□□□□ -0.75
ITGB5-209ENST00000488466 ZNF25P17030 456 aaPredicted RBP10.36□□□□□ -0.75
ITGB5-209ENST00000488466 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
ITGB5-209ENST00000488466 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
ITGB5-209ENST00000488466 TMEM191AQ9H0A3 160 aa10.36□□□□□ -0.75
ITGB5-209ENST00000488466 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
ITGB5-209ENST00000488466 PMCHP20382 165 aa10.35□□□□□ -0.75
ITGB5-209ENST00000488466 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
ITGB5-209ENST00000488466 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
ITGB5-209ENST00000488466 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
ITGB5-209ENST00000488466 ST20Q9HBF5 79 aa10.35□□□□□ -0.75
ITGB5-209ENST00000488466 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
ITGB5-209ENST00000488466 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms