RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 IQCJQ1A5X6 159 aa13.81□□□□□ -0.2
RPL35-203ENST00000487431 SERTAD4-AS1Q5TG53 156 aa13.81□□□□□ -0.2
RPL35-203ENST00000487431 RPP21Q9H633 154 aaKnown RBP13.81□□□□□ -0.2
RPL35-203ENST00000487431 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
RPL35-203ENST00000487431 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
RPL35-203ENST00000487431 SMIM17P0DL12 118 aa13.8□□□□□ -0.2
RPL35-203ENST00000487431 COMMD7Q86VX2 200 aa13.8□□□□□ -0.2
RPL35-203ENST00000487431 RNASE7Q9H1E1 156 aaKnown RBP13.8□□□□□ -0.2
RPL35-203ENST00000487431 M0QY20 66 aa13.79□□□□□ -0.2
RPL35-203ENST00000487431 GATCO43716 136 aaKnown RBP13.79□□□□□ -0.2
RPL35-203ENST00000487431 ADIRFQ15847 76 aa13.79□□□□□ -0.2
RPL35-203ENST00000487431 LINC00269Q8N2A0 174 aa13.79□□□□□ -0.2
RPL35-203ENST00000487431 SSTP61278 116 aa13.78□□□□□ -0.2
RPL35-203ENST00000487431 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
RPL35-203ENST00000487431 GAGE6Q13070 117 aa13.78□□□□□ -0.2
RPL35-203ENST00000487431 CT83Q5H943 113 aa13.78□□□□□ -0.2
RPL35-203ENST00000487431 OSTCQ9NRP0 149 aa13.78□□□□□ -0.2
RPL35-203ENST00000487431 RPL37AP61513 92 aaKnown RBP13.77□□□□□ -0.21
RPL35-203ENST00000487431 FER1L6-AS1Q8NA97 138 aa13.77□□□□□ -0.21
RPL35-203ENST00000487431 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
RPL35-203ENST00000487431 IGHV1-24A0A0C4DH33 117 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 A8MWL6 223 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 F2Z2F3 143 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 H7C1H1 209 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
RPL35-203ENST00000487431 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 CLRN3Q8NCR9 226 aa13.76□□□□□ -0.21
RPL35-203ENST00000487431 GZMBP10144 247 aa13.75□□□□□ -0.21
RPL35-203ENST00000487431 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
RPL35-203ENST00000487431 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
RPL35-203ENST00000487431 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
RPL35-203ENST00000487431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.75□□□□□ -0.21
RPL35-203ENST00000487431 CACNG7P62955 275 aa13.74□□□□□ -0.21
RPL35-203ENST00000487431 REG3AQ06141 175 aa13.74□□□□□ -0.21
RPL35-203ENST00000487431 C20orf203Q8NBC4 194 aa13.74□□□□□ -0.21
RPL35-203ENST00000487431 A0A1B0GUV1 79 aa13.73□□□□□ -0.21
RPL35-203ENST00000487431 TMEM218A2RU14 115 aa13.73□□□□□ -0.21
RPL35-203ENST00000487431 PANO1I0J062 215 aa13.73□□□□□ -0.21
RPL35-203ENST00000487431 MGPP08493 103 aa13.73□□□□□ -0.21
RPL35-203ENST00000487431 CNBPP62633 177 aaKnown RBP13.73□□□□□ -0.21
RPL35-203ENST00000487431 TRAV8-4A0A0B4J246 113 aa13.72□□□□□ -0.21
RPL35-203ENST00000487431 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
RPL35-203ENST00000487431 CIRBPQ14011 172 aaKnown RBP13.72□□□□□ -0.21
RPL35-203ENST00000487431 FAM231BA6NCW3 169 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 F8W036 122 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 CTRLP40313 264 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 WDR73Q6P4I2 378 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 TSKUQ8WUA8 353 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 PGLYRP4Q96LB8 373 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 GFRA4Q9GZZ7 299 aa13.71□□□□□ -0.21
RPL35-203ENST00000487431 PPP1R2P9O14990 202 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 LYZL1Q6UWQ5 148 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 BORCS7Q96B45 105 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 TMEM243Q9BU79 118 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 SEC11CQ9BY50 192 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 V9GYV3 84 aa13.7□□□□□ -0.22
RPL35-203ENST00000487431 IGLV4-60A0A075B6I1 120 aa13.69□□□□□ -0.22
RPL35-203ENST00000487431 IGLV10-54A0A075B6I4 117 aa13.69□□□□□ -0.22
RPL35-203ENST00000487431 TRGC1P0CF51 173 aa13.68□□□□□ -0.22
RPL35-203ENST00000487431 FOXA3P55318 350 aaPredicted RBP13.68□□□□□ -0.22
RPL35-203ENST00000487431 DPH3P1Q9H4G8 78 aa13.68□□□□□ -0.22
RPL35-203ENST00000487431 NIT2Q9NQR4 276 aa13.68□□□□□ -0.22
RPL35-203ENST00000487431 MT-ND4LP03901 98 aa13.67□□□□□ -0.22
RPL35-203ENST00000487431 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
RPL35-203ENST00000487431 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
RPL35-203ENST00000487431 hDV102S1A0JD36 115 aa13.66□□□□□ -0.22
RPL35-203ENST00000487431 UBR4Q5T4S7 5183 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 SLPIP03973 132 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 ADCYAP1P18509 176 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 NTF3P20783 257 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 ANAPC16Q96DE5 110 aa13.65□□□□□ -0.22
RPL35-203ENST00000487431 TWIST1Q15672 202 aa13.64□□□□□ -0.23
RPL35-203ENST00000487431 SMIM15Q7Z3B0 74 aa13.64□□□□□ -0.23
RPL35-203ENST00000487431 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
RPL35-203ENST00000487431 NAT8BQ9UHF3 227 aa13.64□□□□□ -0.23
RPL35-203ENST00000487431 IGHV3-64A0A075B6Q5 118 aa13.63□□□□□ -0.23
RPL35-203ENST00000487431 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
RPL35-203ENST00000487431 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.62□□□□□ -0.23
RPL35-203ENST00000487431 A0A1B0GUT8 65 aa13.62□□□□□ -0.23
RPL35-203ENST00000487431 SMIM27A0A1W2PRY6 76 aa13.62□□□□□ -0.23
RPL35-203ENST00000487431 COTL1Q14019 142 aa13.62□□□□□ -0.23
RPL35-203ENST00000487431 AP5S1Q9NUS5 200 aa13.62□□□□□ -0.23
RPL35-203ENST00000487431 CARHSP1Q9Y2V2 147 aaKnown RBP13.62□□□□□ -0.23
RPL35-203ENST00000487431 UBE2L6O14933 153 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 MT1HL1P0DM35 61 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 AMTP48728 403 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 Q6ZRU5 148 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 SPACA4Q8TDM5 124 aa13.61□□□□□ -0.23
RPL35-203ENST00000487431 RIGQ13278 110 aa13.6□□□□□ -0.23
RPL35-203ENST00000487431 NUP35Q8NFH5 326 aa13.6□□□□□ -0.23
RPL35-203ENST00000487431 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
RPL35-203ENST00000487431 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
RPL35-203ENST00000487431 CTDSP1Q9GZU7 261 aa13.59□□□□□ -0.23
RPL35-203ENST00000487431 A0A087WYN8 130 aa13.58□□□□□ -0.24
RPL35-203ENST00000487431 A0A1B0GW15 77 aa13.57□□□□□ -0.24
RPL35-203ENST00000487431 CHTF8P0CG12 524 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms