RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
PDPN-205ENST00000487038 SSBP4Q9BWG4 385 aaPredicted RBP4.65□□□□□ -1.67
PDPN-205ENST00000487038 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
PDPN-205ENST00000487038 CTXND1A0A1B0GTU2 59 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 H0Y9J4 135 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 M0QY20 66 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 FGF6P10767 208 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 SSTP61278 116 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 GAGE2BQ13066 116 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 RASL11AQ6T310 242 aa4.64□□□□□ -1.67
PDPN-205ENST00000487038 MUC21A0A140T8X8 626 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 SSNA1O43805 119 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 DEFA3P59666 94 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 EIF5AP63241 154 aaKnown RBP4.63□□□□□ -1.67
PDPN-205ENST00000487038 FOXI1Q12951 378 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 RNASEKQ6P5S7 137 aaKnown RBP4.63□□□□□ -1.67
PDPN-205ENST00000487038 NIT2Q9NQR4 276 aa4.63□□□□□ -1.67
PDPN-205ENST00000487038 H7C423 109 aa4.62□□□□□ -1.67
PDPN-205ENST00000487038 S100A9P06702 114 aaKnown RBP4.62□□□□□ -1.67
PDPN-205ENST00000487038 ZNF25P17030 456 aaPredicted RBP4.62□□□□□ -1.67
PDPN-205ENST00000487038 XCL1P47992 114 aa4.62□□□□□ -1.67
PDPN-205ENST00000487038 CAMPP49913 170 aa4.62□□□□□ -1.67
PDPN-205ENST00000487038 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
PDPN-205ENST00000487038 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
PDPN-205ENST00000487038 IGLV4-69A0A075B6H9 119 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 APCSP02743 223 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 TRGC1P0CF51 173 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 FHITP49789 147 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 RPL18AQ02543 176 aaKnown RBP4.61□□□□□ -1.67
PDPN-205ENST00000487038 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
PDPN-205ENST00000487038 CST9LP1Q5W188 147 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 LINC00526Q96FQ7 95 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 TMEM101Q96IK0 257 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 TPPP3Q9BW30 176 aa4.61□□□□□ -1.67
PDPN-205ENST00000487038 A0A087WZ39 114 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 A0A1W2PNN7 141 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 INMT-MINDY4F8WBC2 141 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 CCL25O15444 150 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 APOMO95445 188 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 NCR2O95944 276 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 BCL2P10415 239 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 MALP21145 153 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 SS18Q15532 418 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 ZNF726P1Q15940 193 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 AKR1C8PQ5T2L2 129 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 EIF5AL1Q6IS14 154 aaKnown RBP4.6□□□□□ -1.67
PDPN-205ENST00000487038 PHF5AQ7RTV0 110 aaKnown RBP4.6□□□□□ -1.67
PDPN-205ENST00000487038 CAMK2N2Q96S95 79 aa4.6□□□□□ -1.67
PDPN-205ENST00000487038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.59□□□□□ -1.67
PDPN-205ENST00000487038 BORCS7-ASMTA0A0B4J1R7 106 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 IGKV2-29A2NJV5 120 aaPredicted RBP4.59□□□□□ -1.67
PDPN-205ENST00000487038 MAP1LC3B2A6NCE7 125 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 PFDN1O60925 122 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 RPS20P60866 119 aaKnown RBP4.59□□□□□ -1.67
PDPN-205ENST00000487038 BAGE2Q86Y30 109 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 MLST8Q9BVC4 326 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 MAP1LC3BQ9GZQ8 125 aa4.59□□□□□ -1.67
PDPN-205ENST00000487038 CARHSP1Q9Y2V2 147 aaKnown RBP4.59□□□□□ -1.67
PDPN-205ENST00000487038 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 NTF3P20783 257 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 NUP35Q8NFH5 326 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 OR2D3Q8NGH3 330 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
PDPN-205ENST00000487038 F2Z2F3 143 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.57□□□□□ -1.68
PDPN-205ENST00000487038 TSPAN13O95857 204 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 IGLC6P0CF74 106 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 MEF2BQ02080 365 aaPredicted RBP4.57□□□□□ -1.68
PDPN-205ENST00000487038 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
PDPN-205ENST00000487038 Q6ZNX1 250 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
PDPN-205ENST00000487038 SCO2A0A1W2PP80 73 aa4.56□□□□□ -1.68
PDPN-205ENST00000487038 COX7A2LO14548 114 aa4.56□□□□□ -1.68
PDPN-205ENST00000487038 UBE2BP63146 152 aa4.56□□□□□ -1.68
PDPN-205ENST00000487038 S100ZQ8WXG8 99 aa4.56□□□□□ -1.68
PDPN-205ENST00000487038 MARVELD1Q9BSK0 173 aa4.56□□□□□ -1.68
PDPN-205ENST00000487038 C19orf71A6NCJ1 209 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 BCL2L11O43521 198 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 PAGE4O60829 102 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 ESDP10768 282 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 RPL7L1Q6DKI1 246 aaKnown RBP4.55□□□□□ -1.68
PDPN-205ENST00000487038 TEX261Q6UWH6 196 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 FAM210AQ96ND0 272 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 IMMP2LQ96T52 175 aa4.55□□□□□ -1.68
PDPN-205ENST00000487038 SDHAF1A6NFY7 115 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 C1orf196B1AJZ1 125 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 UPK1BO75841 260 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 PMCHP20382 165 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
PDPN-205ENST00000487038 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 LINC00299Q6ZSB3 139 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms