RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
NR1H3-223ENST00000486991 PHOX2AO14813 284 aa8.99□□□□□ -0.97
NR1H3-223ENST00000486991 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
NR1H3-223ENST00000486991 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
NR1H3-223ENST00000486991 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
NR1H3-223ENST00000486991 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
NR1H3-223ENST00000486991 PMCHP20382 165 aa8.98□□□□□ -0.97
NR1H3-223ENST00000486991 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
NR1H3-223ENST00000486991 DEFB104AQ8WTQ1 72 aa8.98□□□□□ -0.97
NR1H3-223ENST00000486991 TMEM70Q9BUB7 260 aa8.98□□□□□ -0.97
NR1H3-223ENST00000486991 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
NR1H3-223ENST00000486991 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
NR1H3-223ENST00000486991 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
NR1H3-223ENST00000486991 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
NR1H3-223ENST00000486991 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
NR1H3-223ENST00000486991 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
NR1H3-223ENST00000486991 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 I3L3M4 83 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 VCYO14598 125 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 TNP2Q05952 138 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 COTL1Q14019 142 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 ESRGQ1W209 222 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.98
NR1H3-223ENST00000486991 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
NR1H3-223ENST00000486991 TRBV27A0A0K0K1C4 114 aa8.95□□□□□ -0.98
NR1H3-223ENST00000486991 IQCJQ1A5X6 159 aa8.95□□□□□ -0.98
NR1H3-223ENST00000486991 Q9H8V8 135 aa8.95□□□□□ -0.98
NR1H3-223ENST00000486991 FCER1GP30273 86 aa8.94□□□□□ -0.98
NR1H3-223ENST00000486991 RPL32P62910 135 aaKnown RBP8.94□□□□□ -0.98
NR1H3-223ENST00000486991 TMEM97Q5BJF2 176 aa8.94□□□□□ -0.98
NR1H3-223ENST00000486991 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
NR1H3-223ENST00000486991 C18orf32Q8TCD1 76 aa8.94□□□□□ -0.98
NR1H3-223ENST00000486991 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
NR1H3-223ENST00000486991 TRBV6-8A0A0A6YYG3 113 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 PRSS47A8MTI9 375 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 TCAPO15273 167 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 TSHBP01222 138 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
NR1H3-223ENST00000486991 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
NR1H3-223ENST00000486991 AMTP48728 403 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 TIRAPP58753 221 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 LELP1Q5T871 98 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 NTM-AS1Q6ZSK4 140 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 Q8N8P6 123 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
NR1H3-223ENST00000486991 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
NR1H3-223ENST00000486991 TRBV25-1A0A075B6N4 114 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 IGHV1-24A0A0C4DH33 117 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 C16orf90A8MZG2 172 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 C1orf196B1AJZ1 125 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 KRTAP1-5Q9BYS1 174 aa8.92□□□□□ -0.98
NR1H3-223ENST00000486991 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
NR1H3-223ENST00000486991 TRAV8-6A0A0B4J262 113 aa8.91□□□□□ -0.98
NR1H3-223ENST00000486991 NIT1Q86X76 327 aa8.9□□□□□ -0.98
NR1H3-223ENST00000486991 BAGE3Q86Y29 109 aa8.9□□□□□ -0.98
NR1H3-223ENST00000486991 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.98
NR1H3-223ENST00000486991 CHCHD5Q9BSY4 110 aa8.9□□□□□ -0.98
NR1H3-223ENST00000486991 TMEM243Q9BU79 118 aa8.9□□□□□ -0.98
NR1H3-223ENST00000486991 UBE2L6O14933 153 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BKO60814 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BJP06899 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BOP23527 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BBP33778 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BDP58876 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 RAB5BP61020 215 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BCP62807 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST2H2BEQ16778 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.89□□□□□ -0.99
NR1H3-223ENST00000486991 RNASEKQ6P5S7 137 aaKnown RBP8.89□□□□□ -0.99
NR1H3-223ENST00000486991 WFDC10BQ8IUB3 73 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BHQ93079 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BNQ99877 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HIST1H2BMQ99879 126 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 HERC1Q15751 4861 aa8.89□□□□□ -0.99
NR1H3-223ENST00000486991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.88□□□□□ -0.99
NR1H3-223ENST00000486991 IGKV2-29A2NJV5 120 aaPredicted RBP8.88□□□□□ -0.99
NR1H3-223ENST00000486991 Q0VG73 95 aa8.88□□□□□ -0.99
NR1H3-223ENST00000486991 GAGE6Q13070 117 aa8.88□□□□□ -0.99
NR1H3-223ENST00000486991 LAGE3Q14657 143 aa8.88□□□□□ -0.99
NR1H3-223ENST00000486991 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
NR1H3-223ENST00000486991 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
NR1H3-223ENST00000486991 TMEM262E9PQX1 116 aa8.87□□□□□ -0.99
NR1H3-223ENST00000486991 K7EMI3 77 aa8.87□□□□□ -0.99
NR1H3-223ENST00000486991 LINC00614P0C842 121 aa8.87□□□□□ -0.99
NR1H3-223ENST00000486991 ESDP10768 282 aa8.87□□□□□ -0.99
NR1H3-223ENST00000486991 AP5S1Q9NUS5 200 aa8.87□□□□□ -0.99
NR1H3-223ENST00000486991 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
NR1H3-223ENST00000486991 LINC01546A6NGU7 62 aa8.86□□□□□ -0.99
NR1H3-223ENST00000486991 SIVA1O15304 175 aa8.86□□□□□ -0.99
NR1H3-223ENST00000486991 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
NR1H3-223ENST00000486991 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
NR1H3-223ENST00000486991 A0A087WX48 190 aa8.85□□□□□ -0.99
NR1H3-223ENST00000486991 K7EP13 123 aa8.85□□□□□ -0.99
NR1H3-223ENST00000486991 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms