RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 K7EN84 100 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 NTF3P20783 257 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 RBX1P62877 108 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 HAMPP81172 84 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 ALKAL2Q6UX46 152 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 OCC1Q8TAD7 63 aa9.44□□□□□ -0.9
CLDN11-207ENST00000486975 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
CLDN11-207ENST00000486975 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
CLDN11-207ENST00000486975 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
CLDN11-207ENST00000486975 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
CLDN11-207ENST00000486975 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
CLDN11-207ENST00000486975 NKX2-5P52952 324 aaPredicted RBP9.42□□□□□ -0.9
CLDN11-207ENST00000486975 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
CLDN11-207ENST00000486975 RNASE7Q9H1E1 156 aaKnown RBP9.42□□□□□ -0.9
CLDN11-207ENST00000486975 GAGE6Q13070 117 aa9.41□□□□□ -0.9
CLDN11-207ENST00000486975 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 TWIST1Q15672 202 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 CT83Q5H943 113 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
CLDN11-207ENST00000486975 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
CLDN11-207ENST00000486975 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
CLDN11-207ENST00000486975 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 USP17L23D6RBM5 183 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 GATCO43716 136 aaKnown RBP9.38□□□□□ -0.91
CLDN11-207ENST00000486975 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
CLDN11-207ENST00000486975 REG3AQ06141 175 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 C20orf203Q8NBC4 194 aa9.38□□□□□ -0.91
CLDN11-207ENST00000486975 SRRM2Q9UQ35 2752 aaKnown RBP9.38□□□□□ -0.91
CLDN11-207ENST00000486975 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 A8MWL6 223 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 COTL1Q14019 142 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
CLDN11-207ENST00000486975 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
CLDN11-207ENST00000486975 AMTP48728 403 aa9.36□□□□□ -0.91
CLDN11-207ENST00000486975 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
CLDN11-207ENST00000486975 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
CLDN11-207ENST00000486975 FAM210AQ96ND0 272 aa9.36□□□□□ -0.91
CLDN11-207ENST00000486975 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
CLDN11-207ENST00000486975 NCR2O95944 276 aa9.35□□□□□ -0.91
CLDN11-207ENST00000486975 PRSS1P07477 247 aa9.35□□□□□ -0.91
CLDN11-207ENST00000486975 LINC01551Q86U37 167 aa9.35□□□□□ -0.91
CLDN11-207ENST00000486975 SMIM7Q9BQ49 75 aa9.35□□□□□ -0.91
CLDN11-207ENST00000486975 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
CLDN11-207ENST00000486975 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
CLDN11-207ENST00000486975 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
CLDN11-207ENST00000486975 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
CLDN11-207ENST00000486975 CLRN3Q8NCR9 226 aa9.34□□□□□ -0.91
CLDN11-207ENST00000486975 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.91
CLDN11-207ENST00000486975 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 UBE2L6O14933 153 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 CEBPGP53567 150 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 TSKUQ8WUA8 353 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
CLDN11-207ENST00000486975 KRTAP4-2Q9BYR5 136 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
CLDN11-207ENST00000486975 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
CLDN11-207ENST00000486975 ZNF727A8MUV8 499 aa9.32□□□□□ -0.92
CLDN11-207ENST00000486975 H7C423 109 aa9.32□□□□□ -0.92
CLDN11-207ENST00000486975 SRP19P09132 144 aaKnown RBP9.32□□□□□ -0.92
CLDN11-207ENST00000486975 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
CLDN11-207ENST00000486975 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
CLDN11-207ENST00000486975 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
CLDN11-207ENST00000486975 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
CLDN11-207ENST00000486975 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
CLDN11-207ENST00000486975 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
CLDN11-207ENST00000486975 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
CLDN11-207ENST00000486975 TMEM191AQ9H0A3 160 aa9.3□□□□□ -0.92
CLDN11-207ENST00000486975 APCSP02743 223 aa9.29□□□□□ -0.92
CLDN11-207ENST00000486975 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
CLDN11-207ENST00000486975 HERC1Q15751 4861 aa9.28□□□□□ -0.92
CLDN11-207ENST00000486975 I3L3M4 83 aa9.28□□□□□ -0.92
CLDN11-207ENST00000486975 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
CLDN11-207ENST00000486975 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
CLDN11-207ENST00000486975 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
CLDN11-207ENST00000486975 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
CLDN11-207ENST00000486975 V9GYV3 84 aa9.28□□□□□ -0.92
CLDN11-207ENST00000486975 hDV102S1A0JD36 115 aa9.27□□□□□ -0.93
CLDN11-207ENST00000486975 TMEM241Q24JQ0 296 aa9.27□□□□□ -0.93
CLDN11-207ENST00000486975 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
CLDN11-207ENST00000486975 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
CLDN11-207ENST00000486975 RNF185Q96GF1 192 aa9.27□□□□□ -0.93
CLDN11-207ENST00000486975 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.26□□□□□ -0.93
CLDN11-207ENST00000486975 IGKV2-29A2NJV5 120 aaPredicted RBP9.26□□□□□ -0.93
CLDN11-207ENST00000486975 FGF6P10767 208 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 ESDP10768 282 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 RAB4AP20338 218 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 PMCHP20382 165 aa9.26□□□□□ -0.93
CLDN11-207ENST00000486975 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms